Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11117g00001 ATGGCGGGTAATAGTAGCTCGGAGGGTTTGGGCGACGATTTCTTCGAACAGATCTTAGCAGTGCCTGAAGCCCCAGTGGGATACGTGGGGTCCACAACTGGTTTAAGAGGAGGTTTAATGCCTCTTGGCTTGAATTTGGAGCAAGCTGGCTTCCTAAGACACCAAGATTCCAGAAACTTAGTCGACGACGTCGTTAATGTTAATGTTAATGTTGACTCCACCCTTCACACTCTCCATAATAACCACACCACCTCTTCATCTCCCTCTTCTACTGCCCATATGAGGGGTTTGTTTTCAGCCTTTGGACAATTGCATAATCCTACTCATGTTCATTCTGTTCGTCCCACCCTGCCATCGCCTTCACCACCTCCTCAGCCTCAACTCCATCTCCATCATCAAAACCATCAGGCGTTTCAGGGCCAGCTAGGTGCAGCTCCGGTGTCAATGGCTGCTGCTACGCTACAACCACCTGGCATCCGCCCTCGTGTGAGAGCAAGAAGAGGGCAAGCAACCGATCCCCACAGTATTGCTGAGCGGTTGCGTCGTGAAAGAATCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAACAAGACGGACAGAGCAGCGATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTTAAGGTCCTGAGCATGAGTAGACTGGGGGCAGCTGGTGCTGTTGCTCAGCTTGTGGCTGATGTTCCCCTTTCTGCAGTGGAGGGAGAGGACATAGAAGGTGGAGCCAATGAACAAGCCTGGGACAAGTGGTCCAATGATGGCACAGAACAACAAGTGGCTAAACTTATGGAAGAAGATGTGGGAGCAGCTATGCAATTTCTTCAGTCCAAGGCACTTTGCATCATGCCCATATCTCTAGCGTCAGCCATTTTTCGTATGCCTCAATCAGAAGCATCAACAGTCATCAAGCCTGAATCAAACAGTCACTGA 975 0.4954 MAGNSSSEGLGDDFFEQILAVPEAPVGYVGSTTGLRGGLMPLGLNLEQAGFLRHQDSRNLVDDVVNVNVNVDSTLHTLHNNHTTSSSPSSTAHMRGLFSAFGQLHNPTHVHSVRPTLPSPSPPPQPQLHLHHQNHQAFQGQLGAAPVSMAAATLQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLSAVEGEDIEGGANEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTVIKPESNSH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11117g00001 324 SMART finulus 175 224 IPR011598 GO:0046983
Mupr11117g00001 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 229 IPR036638 GO:0046983
Mupr11117g00001 324 FunFam Basic helix-loop-helix transcription factor 164 226 - -
Mupr11117g00001 324 Gene3D - 164 226 IPR036638 GO:0046983
Mupr11117g00001 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Mupr11117g00001 324 Pfam Helix-loop-helix DNA-binding domain 174 218 IPR011598 GO:0046983
Mupr11117g00001 324 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 303 - -
Mupr11117g00001 324 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11117g00001 Mupr-Chr11117 2224 7128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11117g00001 151 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 77.011 2.76e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11117g00001 HLH 3.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11117g00001 - - gmx:100781299 436.417