Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11109g00001 ATGAGTGATGCAAAAGAAAACGAGGAAGCTGCCCAGGGCGCGCCCTTGGTTGTGGAAGAAGAAAATCAGCAGTTGGTTGATGCAAAGGTTCAAGTTCAACCTGAAGCTGCCTCTGCTCCTGTTCCAGTAGAGAAAACTTCAAATCATGTGGAGAGTGGGTCAAATCAGGTTGAGAATTTGAAGGAAGAGCCACCTGCTGAGGATAAAAATGTGGAACTTGAGGCTGTTTCAGAAGGAATTCCACAAGAGGATGTTCAAAATACTCTTAACTCTGTCTCAGTAGAGGCTGATGCTCAGATTTCGAGTAGAACTGAGTGTGAAGAAGCTTCTGTTGCGAAGGTGGAAGCGGAAGAATTTCCCCAGAGTAATAAGGAGGTTGAGAATGATGATAATGTCCAGCAAGCCTGTGGAGTGGCTGATAGTAAAACATGCGATAATAGTAATCCCTTGCCCACAAGTCATAATGAGCTTGCTATGCTGCAACCTGCTCATGCTGATACAAATACTGAAATTATGAATGTATTAGAGATGCAGAATAAGGCTGATGAAAAGCAAGCTACTGAACCTGCAGATAATGGGAATTCAAACTCAAAGCACATGTTTTTCTTGGACGCTGACCATTCCTATGATGGTAATGAGTCAGGAACAGAGGAAGAGCAGTCAGCATTTATGAAGGGGCTTGAAAACTTCTTTAGGGAGAGGAGCATGGAATTCAAACCCCCCAAGTTTTATGGAGAAGGACTAAATTGCCTTAAGCTGTGGAGAGCTGTAACAAGATTGGGCGGCTATGATAAGGCACTTCTTGATTACGAAAGACATAAAATAAAAGGTGGTGAACTGAATGTACCTATTGCTTCTCATCCAGAGCCTACAAATATTGAAAATCAGGCTTCAGCATCAGGTAGAGCCCGGAGAGATGCTGCAGCACGGGCTATGCAGGGTTGGCACTCACAACGTCTCCTAGGCAATGGTGAAGTTAGTGACCCTATTATTAAGGATAGGAATTCCATGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATTTACTCAAACGAAAGAAACCATCTTCATCTTACATGGATAATGCAGTCAAAGCTGCACGCAGTAAACCATCTAAACCACAATTGGACACAACTGTGATTGATATTGGACCTCCTGCTGATTGGGTAAAAGTCAATGTACAAAAAACTAAAGATTGTTTTGAGGTATATGCTTTAGTTCCTGGTCTTCTGCGGGAAGAGGTCCGTGTACAGTCAGACCCAGCAGGACGCCTAGTCATAAGTGGTGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGGTTGTGAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCGGCTGTAGTGACGCTGCATGGGCAGTTGTTTGTTCGTGTTCCATTTGAACAATCAGAATAG 1443 0.4373 MSDAKENEEAAQGAPLVVEEENQQLVDAKVQVQPEAASAPVPVEKTSNHVESGSNQVENLKEEPPAEDKNVELEAVSEGIPQEDVQNTLNSVSVEADAQISSRTECEEASVAKVEAEEFPQSNKEVENDDNVQQACGVADSKTCDNSNPLPTSHNELAMLQPAHADTNTEIMNVLEMQNKADEKQATEPADNGNSNSKHMFFLDADHSYDGNESGTEEEQSAFMKGLENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKALLDYERHKIKGGELNVPIASHPEPTNIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSMSVQKREKQLKSINLLKRKKPSSSYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11109g00001 480 MobiDBLite consensus disorder prediction 45 59 - -
Mupr11109g00001 480 Gene3D - 379 480 IPR008978 -
Mupr11109g00001 480 SUPERFAMILY HSP20-like chaperones 389 476 IPR008978 -
Mupr11109g00001 480 MobiDBLite consensus disorder prediction 181 200 - -
Mupr11109g00001 480 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 380 480 IPR002068 -
Mupr11109g00001 480 Pfam Hsp20/alpha crystallin family 397 479 IPR002068 -
Mupr11109g00001 480 SUPERFAMILY ARID-like 212 286 IPR036431 GO:0003677
Mupr11109g00001 480 Gene3D - 205 276 IPR036431 GO:0003677
Mupr11109g00001 480 CDD ACD_sHsps-like 395 475 - -
Mupr11109g00001 480 FunFam AT-rich interactive domain-containing protein 3 372 480 - -
Mupr11109g00001 480 SMART bright_3 218 276 IPR001606 GO:0003677
Mupr11109g00001 480 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 64 265 IPR045147 GO:0006357
Mupr11109g00001 480 Pfam ARID/BRIGHT DNA binding domain 220 266 IPR001606 GO:0003677
Mupr11109g00001 480 ProSiteProfiles ARID domain profile. 217 320 IPR001606 GO:0003677
Mupr11109g00001 480 Coils Coil 43 63 - -
Mupr11109g00001 480 MobiDBLite consensus disorder prediction 33 72 - -
Mupr11109g00001 480 CDD ARID 219 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11109g00001 Mupr-Chr11109 5926 12091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11109g00001 201 478 ARID Transcription Factor Family AT1G76510 53.481 1.75e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mupr11109g00001 HSP20 1.3e-05 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11109g00001 - - gmx:100791081 791.956