Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11103g00002 ATGTCATTCACGCTGATGGATAGTGATGAGAGTCGACAATCATTGCTTTCAGAATCAAGAGATCATTCTCATGTGAATGACAAAAGTGACCTCCAGAGGAGAAGGCCTTGGGGTGGTAATGCTTCATCAGAGAAAGAGAACAACATGGAAGAACAAAAGGTTGTTAAAAACCCTATACACGCTCAATATATAGATGCAAAGGCAAAACCAGAAGCAGAATTCCATTTCAAGCCAGTGCTTTTGTTCTTAGCTGCATACCTAGGTGGAGGGACCCTATGCTTCCTTCTGACACGTCATCAGATAAAGGGCATAAAAACCAATGGGTTTCTGGATGCTATTTACTTCTGTGTAGTGACAATGACAACTGTTGGATATGGAGATCTTGTGCCAAATAGTAAGTTGGCAAAACTTCTTGCCTGCATTTATGTGTTCACTGGCATGGCTCTTGTTGGGTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAAAAACAGGAAATATTCCTAGTTAGAACCTTATTATGCAAGGGTGAAAATTTTGGTCCAGAAGAGCTTTGCAAAGAGGTTGGAACAAACAAAGTTAAATACAAATTCATGCTGGCAACTTCCACTTTTTTGGTGCTTATGATTGTCGGAACTGTTTTCCTGTATTTTATTGAAAATCTAGATTTTGTTGATGCCCTCTATTGTGTTTGTTCCACAGTCACTACTTTAGGTTATGGGGATAAGAGCTTCACGACTACTATTGGTCGTGCTTTTGCTGTGTTCTGGATATTAAGCAGCACCATGTGCTTAGCTCAGTCTTTTGCTTATCTTGCTGAATTTTATACTGAAGAGAGACAAAGATCACTGGCAAAAATGGTTCTTGCACGAAAATTGTCACTCTTTGATCTCGAGGCAGCTGATCTTGATGGAGACCATGTTGTAAGTGCTACAGAGTTCGTCTTATACAAGTTGAAGGAAATGGGAAAGATCAACCAACAAGATATTTTACTTGTTATGGATATTTTTAAAAAACTAGATTTTGATAAATCAGGAACCCTCACAGAAGCTGATCTCATCATATGTGCTGATTCATCTCAAGTCTCAACCATAGACCACCCTACTACATCATGA 1116 0.3898 MSFTLMDSDESRQSLLSESRDHSHVNDKSDLQRRRPWGGNASSEKENNMEEQKVVKNPIHAQYIDAKAKPEAEFHFKPVLLFLAAYLGGGTLCFLLTRHQIKGIKTNGFLDAIYFCVVTMTTVGYGDLVPNSKLAKLLACIYVFTGMALVGLILSKAADYIVEKQEIFLVRTLLCKGENFGPEELCKEVGTNKVKYKFMLATSTFLVLMIVGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFTTTIGRAFAVFWILSSTMCLAQSFAYLAEFYTEERQRSLAKMVLARKLSLFDLEAADLDGDHVVSATEFVLYKLKEMGKINQQDILLVMDIFKKLDFDKSGTLTEADLIICADSSQVSTIDHPTTS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11103g00002 371 MobiDBLite consensus disorder prediction 1 52 - -
Mupr11103g00002 371 Gene3D - 182 273 - -
Mupr11103g00002 371 MobiDBLite consensus disorder prediction 13 34 - -
Mupr11103g00002 371 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Mupr11103g00002 371 ProSiteProfiles EF-hand calcium-binding domain profile. 328 363 IPR002048 GO:0005509
Mupr11103g00002 371 FunFam Calcium-activated outward-rectifying potassium channel 1 73 168 - -
Mupr11103g00002 371 Gene3D - 274 367 - -
Mupr11103g00002 371 SUPERFAMILY Voltage-gated potassium channels 191 291 - -
Mupr11103g00002 371 Gene3D - 60 170 - -
Mupr11103g00002 371 ProSitePatterns EF-hand calcium-binding domain. 302 314 IPR018247 -
Mupr11103g00002 371 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 85 330 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mupr11103g00002 371 SUPERFAMILY EF-hand 299 356 IPR011992 -
Mupr11103g00002 371 SUPERFAMILY Voltage-gated potassium channels 79 169 - -
Mupr11103g00002 371 Pfam Ion channel 205 277 IPR013099 -
Mupr11103g00002 371 Pfam Ion channel 83 162 IPR013099 -
Mupr11103g00002 371 PRINTS Two pore domain K+ channel signature 118 146 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mupr11103g00002 371 PRINTS Two pore domain K+ channel signature 236 245 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11103g00002 Mupr-Chr11103 4178 6411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11103g00002 50 362 Ion Channels AT5G55630 54.633 3.29e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11103g00002 K05389 - gmx:100799492 579.711