Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11100g00008 ATGGAGTCTCAGCCACTTATGGGTTGGAGCTCTTACTATCAAATAGATGAAAAACCATTTCCATTTACGTGCCAATTTTCTTACAGCGAAAACGGTGAAGTACTGTATCCTGCACTGGATTATTGGCCACACGATTTTTCCATACAAGACGGTTATCTTGATGTTGTTCCTCTCATGGAGTATTACCCTTCAGATCCTTTGTATGAAACTCTCGCCATTGAACCAACACCAAGCATGCAAGACTATGATTATTATGATATTAAAAAGGGATTTTCTGTGTGGAACGAAGTTGATGCTGTGTTTGATTCAGAAAAAGTTTTGATATTTCGCAACAAGGAAGAAATCAGGGGTGGGAAGGAAATGATGGAAGATGGTAAGGTTAATCGAGGGGTAGAAGAGAGAATTAGCAGAGGAAGTACGAGAATGTTATCAAGGAAGAACATATCTCAGTACTTCTACATGCCCATAACACAAGCAGCCAGAGAACTTAATGTGGGCCTAACACTTTTGAAGAAAAGGTGTAGGGAATTGGGGATTCGAAGGTGGCCCCACAGGAAGCTCATGAGCTTGCAAACCCTGATAAATAATGTGCAGGAGATAAGGAAAGAGGAGGGGCCAAAGAGTGAAGAGAAGTTAAAAAATGCCATTGAGATATTGGAGAGGGAAAAGAAGCTTTTGGAGGAAATGCCAGATATTGATCTTGAAGATAATACAAAAAGGCTTAGACAAGCCTGTTTCAAGGCCAACTACAAGAAGAGGAAGCTGGTTGGTAGGAGTGAACCACAATCTTCTTTCAGTGACTGTGCTAGAACTATTGACACAACAGGAGAATATAGTTATGAAAATGAAGAACAACAACAAGACTTCAAATCTCTTTTGTCT 882 0.4014 MESQPLMGWSSYYQIDEKPFPFTCQFSYSENGEVLYPALDYWPHDFSIQDGYLDVVPLMEYYPSDPLYETLAIEPTPSMQDYDYYDIKKGFSVWNEVDAVFDSEKVLIFRNKEEIRGGKEMMEDGKVNRGVEERISRGSTRMLSRKNISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQEIRKEEGPKSEEKLKNAIEILEREKKLLEEMPDIDLEDNTKRLRQACFKANYKKRKLVGRSEPQSSFSDCARTIDTTGEYSYENEEQQQDFKSLLS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11100g00008 294 Pfam RWP-RK domain 143 190 IPR003035 -
Mupr11100g00008 294 ProSiteProfiles RWP-RK domain profile. 125 211 IPR003035 -
Mupr11100g00008 294 PANTHER PROTEIN RKD4 123 282 IPR044607 GO:0003700
Mupr11100g00008 294 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11100g00008 Mupr-Chr11100 64870 66248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11100g00008 129 261 AtRKD Transcription Factor Family AT1G18790 65.672 1.79e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr11100g00008 RWP-RK 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11100g00008 - - gmx:100788666 426.017