Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11099g00001 ATTGAGCTTCTTAGATTATGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTACGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCCTGGAACGAAGGGCAACCCATCATGGGTTCAAAATGAGTGATGAATTGGGGTTCAAATGTGATATGAATCAAGGGGAATGTCGTGCTAGATATGCTTGCCATTTGGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCACAGGGGAGTCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCATTGGAGGTGAACCCTGAGGACATGGTTCGTTTTGCAAAGGAAAAGCCTCAGATGATGGCCTCCTATTCTGTTTCTGATGCAGTGGCAACTTATTATTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCAACCATTATACCCATGCCACCAGATGAGGTTTTGCGCAAAGGTAGTGGAACTCTCTGTGAAATGTTGCTTATGGTGCAGGCATACAAGGCTAATGTTATCTGCCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAATAATCATCTTCTTGAGAGCGAGACATACATTGGTGGACATGTGGAATGTCTCGAAAGTGGTGTATTCAGATCTGATATTCCATCTAGTTTTACACTCGAGCCATCTGCCTATCAGCAACTGATCGACAACCTCGATCGAGATCTGCAGTATGCTATAAGAGTGGAGGGTAAGATGGATGATTTGGAATCTGTCTCTAATTATGATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTAAAATTACGAGATGCGCCAATACGTGAAGAATGCCCCCTCATTTATCATCTGGACGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGACTTCAGCCACCATCAATTGTTACAGATGAAATTTGCACTGCATGTGATTTTAATCGTCCTGGAAAGACTTGCCTACGCAAGCTTGAGTGGGTTTGGCGTGGAGAAACATTCATGGCAAAGAAAAGTGACTATTATGGTTTAAAGACACAGATTGAGTCAGAGTTTGTTGATGATTCTGAGAACAATAACAACAACAACAACAAAGCCTTATCTCACTATTCTGAGAAGAGGTCATCAAAATCTTTTCTTGACCTTCCCAAGTCTGAGCAACAATCAAGACTGAAAGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTTGACAAACCAGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTCAATAAGGTTTGGAAGGGAAAACTGTCAATGGCCAAGGCTAGTGGAAATTCTATGGAGATCCAGGAAGCACAAGATATGGTTGTGCTTTATGATTCATTACAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGCGTAGTGACATATACTGGTGCAAAAATCATTCAGAATGCCCGCTTACTAGTAGAGAAAATAGGAAAACCACTTGAACTAGACACGGATGGTATCTGGTGTGCACTTCCTGGATCTTTTCCGGAAAATTTCACTTTTAAAACCAAAGACTCAAAGTGGAAATTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAATGATCAGTACCAGACACTGACAGATCCAATCAGGAAAACTTATACAACTCACAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTTTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCATGGTTCAACCTTAGAGGAATGCTATTCTGCTGTTGCTTCAGTTGCAAACCGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATTGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTAGCTAACTTTCTTGGTGATGCAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAATAGCAAGTGAACCCAAGGGAACACCAGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCTGGAGGTGTATGCTTAATGTTTGCAGAGGTAATGAAGTTTTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATTCGATCCATAGTTGACTGGTCCTATTACAAGCAGCGGCTTAGTTCCAATATTCAAAAAATTGTCACTATTCCTGCTGCAATGCAAAAGATTGCAAATCCTGTCCCTAGGGTTGTTCATCCTGATTGGTTGCATAAGAAGGTACGTGAGAAGGAGGACAAGTTTCGGCAACGGAAATTAGTTGATGTTTTTAAATCAATGAACAGGAATGAGCACTCAAAAAAGCATAATGACTCAAATTGTGTCCATCTTGCGATGGATGATGAGATTGTCAATGAGTTGGAGGACTTTGGAAACAAAGGCAGGAGTTCTACATGCAAACCTAGACCAATTATCCGGCATTATGAAGCTAATAAGGAACGACATTCCAGGAAGCTCAATGATCGGGATTTGGAGCAACAGTGTAATGCTGATAATAGCAGCAAGGATCAACTACTTTCACCATTACAACAAAATGAAATATTATGTGAAAATGTTGACAGAAATGTAGATTATCAAGGATGGCTTCAAATAAAGAAGCAAACGTGGAAAAATATTCTGGAAAGGAGAAAGAAGCGAAGATTTGAGAATTCAAGGAAATCTGACCCTAGAATTAGTGTTCTGGAACAAATGAATAGTAAGAGGAGTGAAGGCAGAAGTCGTGTCAGTTCATATCTTAAAAGGCTCGAGGTAGACATAAGAAAGTGTCACTGGCAGATAATACAGCTAGTTCCAAGTCCACTGATAGGCCAATTTTTTGCTTGGGTTGTTATTGATGGGAGTATGCATAAGATTCCTGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCTCGATCGCCAATTACTGAAGAATTTATGGGTAAACGCATCAACAAGACTCTTCCTCGTGGAAGGCATAGTTATAACCTATATGAGGTCTCAATTAATGAAATTCAATACGGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTGGCAGATCCTGATGTTGAGGTCAGCATACTTATTAATCATTAA 3405 0.3985 IELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHHGFKMSDELGFKCDMNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFTLEPSAYQQLIDNLDRDLQYAIRVEGKMDDLESVSNYDEVKNAIMEKLVKLRDAPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYGLKTQIESEFVDDSENNNNNNNKALSHYSEKRSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSMAKASGNSMEIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKWKLTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLANFLGDAMVKDKGLRCQYIIASEPKGTPVSERAVPVAIFETDAGGVCLMFAEVMKFYVRKWCKVSSDVGIRSIVDWSYYKQRLSSNIQKIVTIPAAMQKIANPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFKSMNRNEHSKKHNDSNCVHLAMDDEIVNELEDFGNKGRSSTCKPRPIIRHYEANKERHSRKLNDRDLEQQCNADNSSKDQLLSPLQQNEILCENVDRNVDYQGWLQIKKQTWKNILERRKKRRFENSRKSDPRISVLEQMNSKRSEGRSRVSSYLKRLEVDIRKCHWQIIQLVPSPLIGQFFAWVVIDGSMHKIPVSVPRVFYLNSRSPITEEFMGKRINKTLPRGRHSYNLYEVSINEIQYGEASKKLAALLADPDVEVSILINH 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11099g00001 1134 Pfam DNA polymerase family B 458 768 IPR006134 GO:0000166|GO:0003677
Mupr11099g00001 1134 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 2 1127 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Mupr11099g00001 1134 MobiDBLite consensus disorder prediction 373 388 - -
Mupr11099g00001 1134 FunFam DNA polymerase epsilon catalytic subunit 43 156 - -
Mupr11099g00001 1134 MobiDBLite consensus disorder prediction 356 372 - -
Mupr11099g00001 1134 SMART polmehr3 1 546 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mupr11099g00001 1134 Gene3D - 645 837 IPR042087 -
Mupr11099g00001 1134 MobiDBLite consensus disorder prediction 916 930 - -
Mupr11099g00001 1134 FunFam DNA polymerase epsilon catalytic subunit 645 837 - -
Mupr11099g00001 1134 Gene3D Palm domain of DNA polymerase 456 641 IPR023211 -
Mupr11099g00001 1134 MobiDBLite consensus disorder prediction 901 930 - -
Mupr11099g00001 1134 FunFam DNA polymerase epsilon catalytic subunit 454 641 - -
Mupr11099g00001 1134 Gene3D - 1 156 IPR036397 GO:0003676
Mupr11099g00001 1134 FunFam DNA polymerase epsilon catalytic subunit 427 502 - -
Mupr11099g00001 1134 SUPERFAMILY DNA/RNA polymerases 157 855 IPR043502 -
Mupr11099g00001 1134 SUPERFAMILY Ribonuclease H-like 2 178 IPR012337 -
Mupr11099g00001 1134 CDD POLBc_epsilon 191 834 - -
Mupr11099g00001 1134 MobiDBLite consensus disorder prediction 356 388 - -
Mupr11099g00001 1134 Pfam DNA polymerase family B, exonuclease domain 2 88 IPR006133 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11099g00001 1 1127 Core DNA Replication Machinery Family AT1G08260 76.486 0.0 1756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11099g00001 K02324 - gmx:100812003 2048.86