LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr11093g00002	ATGGCTAATGAAACCTCGTCAAATGGGTCGTCTTCATCTGTTCCAGTAAATGCTTCGGCTCCGTTGGCGTCATCTACGTTGTTGTCCGATGACGAAGAGTCTCCGAAAGAAACACCGTCAAAATCTCCGCCGCCGTCGCCGTCTTCACCGTCACCGCCGACCGAATCTTCACCTCCACCGAAACAATCACCGCCGGCGCCGGCTCAATCTCCGCCGCCGACCCAGTCTCATTCTCCTCCTCCTTCCCCTTCTCCCTCGCCGCCGTCGCCGTCACCGTCACCGCCACCCTCTCCTCCAACGTCATCGGCGTCGCCACCGGAGCCGTTGCTGCCATCACCGCCGCCCCCTCAAAGTTTGCCTGCATCACAATTCGAAGCCCCTCCGCCACCTTACCTTTCGCCTCCAATTAGAATTCCAACTCCACCTTCACCCACTTCTCGTGTTACTCCGCCGCTGGTGCCAACTGCTTCATTGTCAAACCAACCTTCACCACCGCGCTTACGGTCCGTTTCTCAACCAAAACCAAGGGCCGCTTCCCCGAAAAGCAGCTTCACGTCCATGTCACCTAGCTCCGGTTATACTAAAGGAGAAATTGTCGGTTTTTCTCTGGCCGGGGTTTTCTTCATTGCCTTTCTTGCTCTAGTTATTTTCTTTATATCCATGAGGAAGAAAAGGCAAGAGAATATCTTTCCCGCGCCACCCCATGGGAGATTCCATATGCAAGGAGGTGGAGATTTGCATTACTATATAGAGGATCCTGGTTTTGAAAATGGTCAAGGTGCGATTCATTTAAGAAGTCCTTCAGATCCGGCTCAGCATATGAGCACTGGTCCGACAGTTTTTACCTACGACAAGGTTGCGGAGATCACTAACGGATTTTCGAAGGAAAACATAATTGGGGAGGGGGGATTTGGGCATGTTTACAAGGCTACAATGCCTGATGGTAGAGTGGGAGCGGTTAAGATGTTGAAGGCTGGTAGTGGGCAGGGAGAAAGGGAGTTCAGGGCTGAGGTCGACATAATCAGCCGTATCCATCATCGACATTTGGTATCGTTAATTGGTTATTGCATATCTGCACAGCAAAGAGTGCTTATCTATGAGTACGTTCCTAATGGGAATCTCAATCAGCACTTGCATGGAAATGTATGGCCAATTTTGGATTGGCCCAAGCGGGTGAAGATAGCAATTGGCGCTGCAAGGGGCATAGCATATCTTCATGAAGGATGCAACCCAAGGATTATTCACAGAGATATTAAATCGGCAAATATACTTTTGGATAATGCTTATGAGGCAGAGGTTGCAGACTTTGGACTTGCCAAGCTAACCGACGATGCTAATACCCACGTATCAACTAGGGTGATGGGGACCTTCGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGTGTTGTTCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAAAGCAGCCCATAGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGGGCAGTTGAGACAGGTGACTTTGGTGAACTAGTAGACCCTAGGCTTGAACTGCAATATGATGACAATCAAATGTTCAGAATGATTGACGCAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGACCTCGAATGGTTCAGGTGGCAAGAGCCATAGATAGTGATGATCAACTAAATGATCTATCTAATGGGGTGAAATATGGTCAGAGCATTGTTTATGATTCTGGCCAGTATAAGGAAGACATTATGAGATTCAGAAGGATGGCTAATGGCAGCTATCATGATTCTGACTTTGATATGTACAGTAACAAATACCGTTCAACTATTTCACCAGAAATATCTGGACCCAAACATACAAGGATGCCATATGGTGCAGGTGGTGATTCAGAAATTAGAGTTTCGGATGGCCAAGGGAGCTATGTCCAGAACATATCTTGA	1980	0.4813	MANETSSNGSSSSVPVNASAPLASSTLLSDDEESPKETPSKSPPPSPSSPSPPTESSPPPKQSPPAPAQSPPPTQSHSPPPSPSPSPPSPSPSPPPSPPTSSASPPEPLLPSPPPPQSLPASQFEAPPPPYLSPPIRIPTPPSPTSRVTPPLVPTASLSNQPSPPRLRSVSQPKPRAASPKSSFTSMSPSSGYTKGEIVGFSLAGVFFIAFLALVIFFISMRKKRQENIFPAPPHGRFHMQGGGDLHYYIEDPGFENGQGAIHLRSPSDPAQHMSTGPTVFTYDKVAEITNGFSKENIIGEGGFGHVYKATMPDGRVGAVKMLKAGSGQGEREFRAEVDIISRIHHRHLVSLIGYCISAQQRVLIYEYVPNGNLNQHLHGNVWPILDWPKRVKIAIGAARGIAYLHEGCNPRIIHRDIKSANILLDNAYEAEVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKQPIGEESLVEWARPLLLRAVETGDFGELVDPRLELQYDDNQMFRMIDAAAACVRHSAPKRPRMVQVARAIDSDDQLNDLSNGVKYGQSIVYDSGQYKEDIMRFRRMANGSYHDSDFDMYSNKYRSTISPEISGPKHTRMPYGAGGDSEIRVSDGQGSYVQNIS	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr11093g00002	659	ProSiteProfiles	Protein kinase domain profile.	293	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11093g00002	659	PRINTS	Proline rich extensin signature	41	53	-	-
	Mupr11093g00002	659	PRINTS	Proline rich extensin signature	53	74	-	-
	Mupr11093g00002	659	PRINTS	Proline rich extensin signature	81	97	-	-
	Mupr11093g00002	659	MobiDBLite	consensus disorder prediction	1	191	-	-
	Mupr11093g00002	659	MobiDBLite	consensus disorder prediction	39	149	-	-
	Mupr11093g00002	659	MobiDBLite	consensus disorder prediction	175	191	-	-
	Mupr11093g00002	659	SMART	serkin_6	293	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11093g00002	659	FunFam	Proline-rich receptor-like protein kinase PERK8	266	368	-	-
	Mupr11093g00002	659	SUPERFAMILY	Protein kinase-like (PK-like)	272	564	IPR011009	-
	Mupr11093g00002	659	Gene3D	Transferase(Phosphotransferase) domain 1	369	583	-	-
	Mupr11093g00002	659	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	413	425	IPR008271	GO:0004672\|GO:0006468
	Mupr11093g00002	659	CDD	STKc_IRAK	299	564	-	-
	Mupr11093g00002	659	MobiDBLite	consensus disorder prediction	1	29	-	-
	Mupr11093g00002	659	FunFam	proline-rich receptor-like protein kinase PERK8	369	581	-	-
	Mupr11093g00002	659	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	209	608	IPR047117	-
	Mupr11093g00002	659	Pfam	Protein tyrosine and serine/threonine kinase	296	564	IPR001245	GO:0004672\|GO:0006468
	Mupr11093g00002	659	MobiDBLite	consensus disorder prediction	150	167	-	-
	Mupr11093g00002	659	Gene3D	Phosphorylase Kinase; domain 1	262	368	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr11093g00002	Mupr-Chr11093	12618	16843	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr11093g00002	192	619	Trihelix Transcription Factor Family	AT1G70460	59.645	0.0	547

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Mupr11093g00002		PK_Tyr_Ser-Thr	9.8e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr11093g00002	-		-	gmx:100807815	786.949