Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11090g00001 ATGGGTTACGTGGGCATGGGGGAGAACACGCGGCAGGGGGCGCGTGAGGGGAAAGTTGACGTCAACGCGCTTTTGGTTTGCCCTAACGCAAGGGAGGGCATGACGGAAGTTGCTCTCTCTCTCGTTCTTATCCATCGCATTGAAAAGCAGCAGCATCACCACACCCACGCATGTCCACCACCCTGTTCCCTTCTTCAATCAGTTGACTCTCCCTTCCTCTATTCATTAGGTGCGATGGAGCCTATGGACATCGTTGGCAAGGCCAAGGAAGATGCTTCTCTCCCTAAAGCCACAATGACCAAAATTATTAAAGAGATGTTGCCCCCTGATGTCCGTGTCGCCAGAGATGCGCAGGATTTATTGATCGAGTGTTGTGTCGAGTTTATAAACCTCATCTCGTCTGAGTCCAATGAAGTCTGTAACAAAGAGGAAAGAAGAACGATTGCACCTGAGCACGTGTTGAAGGCTTTAGGGGTTCTTGGATTTGGCGAGTACATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGCTGGAGACAATGCAAGACTCTATAAAAGGTGCGAAGTGGAGCAACAGAGCTGAGATGACTGAGGAAGAAGCATTGGCTGAACAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGAGGAGCCATTACTTCCAAGCAGCCAGACGCTGACCAAAGTTTAGAGAGCTAA 705 0.4922 MGYVGMGENTRQGAREGKVDVNALLVCPNAREGMTEVALSLVLIHRIEKQQHHHTHACPPPCSLLQSVDSPFLYSLGAMEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETMQDSIKGAKWSNRAEMTEEEALAEQQRMFAEARARMNGGAITSKQPDADQSLES 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11090g00001 234 Gene3D Histone, subunit A 82 221 IPR009072 GO:0046982
Mupr11090g00001 234 PANTHER PROTEIN DR1 HOMOLOG 79 233 IPR044255 -
Mupr11090g00001 234 SUPERFAMILY Histone-fold 90 221 IPR009072 GO:0046982
Mupr11090g00001 234 Coils Coil 193 213 - -
Mupr11090g00001 234 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 92 157 IPR003958 -
Mupr11090g00001 234 FunFam Negative cofactor 2 beta 84 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11090g00001 Mupr-Chr11090 16904 20412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11090g00001 79 230 CCAAT-DR1 Transcription Factor Family AT5G23090 81.818 3.26e-90 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr11090g00001 CBFD_NFYB_HMF 1.7e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11090g00001 K21751 - gmx:547635 302.367