Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11082g00002 ATGGAAAGCCAAGAGCCACTACAACCCGAAAACAACCCGTTCCTCTTCACGATTCCTTCGGTGTTTCAAAACCCTTTGGAGGCTCAAGAGCAAGGGCTATTATGTGACATTGACTGGGGTAACATTTTCTCTACCCAAAACAACGGGGAAGCCAAGGACACCACTATTATTGAATGCGCTTCTTCGTCTTCTCTCGTGCCTCAAATTAAGGAAAACAAAGAGAAAAGGAAAGGTGGGAGGTTGAAGAAAACAACACGAGTACCAAGGTTTGCGTTTCAAACCAGAAGTGCTGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGCCAGAAAGCTGTCAAGAATAGCACATTTCCCAGAAGCTACTACCGCTGCACGCATCACACATGCAATGTGAAGAAGCAAGTGCAAAGGCTATCGAAAGACACAAGCATTGTGGTGACGACTTACGAGGGAATTCACAACCACCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTTCTCAAGCAAATACAGTTTCTTGCTAGCTTGTAA 543 0.4494 MESQEPLQPENNPFLFTIPSVFQNPLEAQEQGLLCDIDWGNIFSTQNNGEAKDTTIIECASSSSLVPQIKENKEKRKGGRLKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTFPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11082g00002 180 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr11082g00002 180 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr11082g00002 180 Gene3D WRKY domain 86 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr11082g00002 180 FunFam WRKY transcription factor 57 87 161 - -
Mupr11082g00002 180 SUPERFAMILY WRKY DNA-binding domain 94 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr11082g00002 180 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 162 IPR044810 GO:0003700
Mupr11082g00002 180 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11082g00002 Mupr-Chr11082 6042 7179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11082g00002 65 180 WRKY Transcription Factor Family AT5G41570 68.966 3.82e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr11082g00002 WRKY 6.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11082g00002 - - gmx:100796481 281.952