Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11078g00002 ATGGGAAGGGCGTCAAAGTGGTTTCGCGGGCTTCTAGGTCTCAAAAAAACAGAGTACACAAGCTCACCCGCCAAACCACCCAAAGAGAAGCGCCGATGGAGCTTCGTCAAATCATACACAGAAAAGGACAACAACAACAACGCGTCTCCACAGCACCACGCCATGGCAGTCGCAGCAGCCACCGCTGCCGTGGCTGAGGCCGCAGTGGCTGCCGCCGAAGCCGCTGCCGTCGTTGTCAGACTCACAAGCAGCAGCGGCAGGTGCGCCGACGCCGGGCCCGTCAGGATTCGCCAACACTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGCGTGCATTAAAGGGGTTGGTGAAGCTCCAAGCACTGGTGAGAGGTCACATTGAGAGGAAACGGACGGCAGAATGGCTGAAAAGAGTGAAAGCACTATTACAAGCACAGGCACATGCCTCATCTTCGACTGCAAAGTTATCTAGCCACCTCCATGGTCCAGCGACACCCGAAAAATTTGAAAGCCCCATCAGATCTAAGAGCATGAAACACGAGCAGTCATCTATACTCAAGAGAAATGGCTCGAAATCCTGTGTCCAGATCAATGGCTACCAAGAGATATGTGGGAGTAGATCAGAGAGTCAAGTACATGAACAATCATGGAGTTCAGGAAGATCATTGGTAAGAACTTACAGCTCCAATGATGAAAGAAATGACAGGGTTCTTGAAATTGATTCTGGAAAACCACCCTTCACACTAAAGCGTAGAAACCTCTCTTATTCCACGGGTTCTGACCATTATAGCAAGAGTTTGAACAGCACTAAGGAGTCAACATCTCTTCAATCTGTTCAAAGCCCATGTTGTGAAGTTCAGTCTTACAGTTACAGCTCACAAAAAATCAACGAGGTTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCCCAATTTTTATCTGCCACTTCCAAAGATGAAGGTTTCAAAAGAAGCCCTTTTACTCCTACTAGGAGTGATGGCTCTAGAAACTACATTCGTGGTTATCCTGATTACCCAAGTTACATGGCATGCACCGAATCTTCTAAAGCAAAGGCCAGGTCTCTGAGTGCCCCAAAACAAAGGCCACAATGTGAGAGGTCCGGTTCGTCTAATAGGTACTCACTTAATGGGTGTGATGTGTCAAGATTGGCCACACAAAGGGCAATGCATGCAAACTTCACCAACAAAGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGATGAGGCTAACAGCCCGAAA 1290 0.4876 MGRASKWFRGLLGLKKTEYTSSPAKPPKEKRRWSFVKSYTEKDNNNNASPQHHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCADAGPVRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLKRVKALLQAQAHASSSTAKLSSHLHGPATPEKFESPIRSKSMKHEQSSILKRNGSKSCVQINGYQEICGSRSESQVHEQSWSSGRSLVRTYSSNDERNDRVLEIDSGKPPFTLKRRNLSYSTGSDHYSKSLNSTKESTSLQSVQSPCCEVQSYSYSSQKINEVEESPFCTADNSPQFLSATSKDEGFKRSPFTPTRSDGSRNYIRGYPDYPSYMACTESSKAKARSLSAPKQRPQCERSGSSNRYSLNGCDVSRLATQRAMHANFTNKAYPGSGRLDKLDEANSPK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11078g00002 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 147 IPR027417 -
Mupr11078g00002 430 SMART iq_5 97 119 IPR000048 GO:0005515
Mupr11078g00002 430 SMART iq_5 120 141 IPR000048 GO:0005515
Mupr11078g00002 430 Pfam Protein of unknown function (DUF4005) 318 394 IPR025064 -
Mupr11078g00002 430 Pfam IQ calmodulin-binding motif 125 139 IPR000048 GO:0005515
Mupr11078g00002 430 Pfam IQ calmodulin-binding motif 99 119 IPR000048 GO:0005515
Mupr11078g00002 430 MobiDBLite consensus disorder prediction 410 430 - -
Mupr11078g00002 430 MobiDBLite consensus disorder prediction 367 392 - -
Mupr11078g00002 430 PANTHER IQ-DOMAIN 5-RELATED 1 392 - -
Mupr11078g00002 430 MobiDBLite consensus disorder prediction 180 194 - -
Mupr11078g00002 430 Gene3D - 95 151 - -
Mupr11078g00002 430 MobiDBLite consensus disorder prediction 324 344 - -
Mupr11078g00002 430 MobiDBLite consensus disorder prediction 161 196 - -
Mupr11078g00002 430 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Mupr11078g00002 430 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11078g00002 Mupr-Chr11078 8722 12246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11078g00002 1 423 IQD Protein Family AT4G23060 39.923 1.48e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11078g00002 - - gmx:100793587 676.396