Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11067g00001 ATGTCGCAACGGGCGGTGCCGGCGCCGTTCTTGACGAAGACGTATGAGTTGGTGGAGGATGCGGGCACGGATGAGGTGATATCGTGGAGCGAGAGTGGGAATGCTTTTGTGGTGTGGAAGCATGCGGATTTTGCAAAGGATTTGCTTCCCAAATATTTTAAGCACAATAACTTCTCAAGCTTTGTTCGCCAGCTCAACACCTATGGATTCCGAAAGACGGTGCCAGACAAATGGGAATTCGCGAACGACCATTTCAAGAGAGGCCATAAGGAGCTCCTCTCGGAGATCAAACGCCGCAAGACCGTACCCCAATCATCGGCGCATCTCCCGGAGGCCGGAAAGTCCGGCGGCGACGGCAACTCTCCGTCAAACTCCGGCGGAGACGAGGCGGGGTCCACCTCAACCTCATCCTCGTCCTCTGGTTCGAAGAACCCGGGATCGATGGACACACACACAACAACTTCTAACGAGTTATCGAGCGAGAACGAGAAACTGAAGAAGGATAACGAAACGCTGAGTTCGGAGCTGGCACGTGCGAGGAAGCAGTGCGATGAACTCGTTGCTTTTCTGAGGGACCGTCTGATGGTGGGTCCCGATCAGATCGATCGCATCATGCGGCAAGGAAGTTGTGGATCTGAGAAGGCGGTAGGTGAAGGTGGAGGAGACTGTTTGAAACTGTTTGGTGTTTGGTTAAAAGAGGATACACTAACGGACAAAAGAAACAACCACAAGAGAGCCCGCGAAGACCAAATGGGCTTCGGTGGGCCTCGCCTCAAGGAGTCCAAGCCTGTTGTTGACTTTGGAGCACCTGTAAATGTCATGATGAAGAGCAACAAGCAATTAAAGAAATGGGATAATGCAAAGGCGATAATCATGGTTTGGGAAAAAAGACCAAACGTGCTAGCCTCTGTTTCCTCCACATGTCCAATGGAGCTGCACGATCCCTGCCTCCTGGCAACGGGTTCTCTGCCTTCATTACCTATGGAATCAGAT 993 0.5196 MSQRAVPAPFLTKTYELVEDAGTDEVISWSESGNAFVVWKHADFAKDLLPKYFKHNNFSSFVRQLNTYGFRKTVPDKWEFANDHFKRGHKELLSEIKRRKTVPQSSAHLPEAGKSGGDGNSPSNSGGDEAGSTSTSSSSSGSKNPGSMDTHTTTSNELSSENEKLKKDNETLSSELARARKQCDELVAFLRDRLMVGPDQIDRIMRQGSCGSEKAVGEGGGDCLKLFGVWLKEDTLTDKRNNHKRAREDQMGFGGPRLKESKPVVDFGAPVNVMMKSNKQLKKWDNAKAIIMVWEKRPNVLASVSSTCPMELHDPCLLATGSLPSLPMESD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11067g00001 331 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr11067g00001 331 MobiDBLite consensus disorder prediction 95 169 - -
Mupr11067g00001 331 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr11067g00001 331 Gene3D - 2 101 IPR036388 -
Mupr11067g00001 331 FunFam Heat stress transcription factor B-4 2 100 - -
Mupr11067g00001 331 Gene3D - 149 196 - -
Mupr11067g00001 331 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr11067g00001 331 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr11067g00001 331 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr11067g00001 331 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 206 IPR027725 -
Mupr11067g00001 331 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Mupr11067g00001 331 MobiDBLite consensus disorder prediction 117 159 - -
Mupr11067g00001 331 Coils Coil 155 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11067g00001 Mupr-Chr11067 1226 3484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11067g00001 2 271 HSF AT4G36990 52.448 1.66e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr11067g00001 HSF_DNA-bind 1.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11067g00001 K09419 - gmx:100791543 484.952