Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11066g00004 ATGACACTAAGCACGTTGTTCAACTGGGACACTCGTCACTCCGAAACAAGCAGCACCTTCGAAGAAGCCATGCTAGAAGAAGTAGCAGCACCAAACCTTCAGCACTTTTTTCCCTACTCAGATGAAGGCTCCTTCTGTTCAAACGCGCTTTTTGAGAACTATTTTGACCCAAATGGTGGTTCTCTCTACCCTCCTTACGATCCGTATGTTTCACTCACTTATCATGATACTTTCCTAACTCAGGAAGATTACAATCTTCTCCCATGCCCAAAACGCCAAAAGTTCTCCGAACAACAACAACAAGTGCACTCTTCATTGCAAGAGCTTATTACACCAACAATAGTATCATCCAGTTTCTTCGAAGGGTTTTTTGTGCCTAATGATAATGCTTGCTCTTTGCAAGCAGAGGAACTGCAACAACAACAACTCTTCTCCGACGTTCCACAACATGGTACTTTTGTGGATCTTCAGTGTGAGAAGAAAGGTAACGAGAGAACGATATCTCCACAGAGCATAGTGGCAAGAGAAAGGAGAAGAAAGATCACTGAGAAGACTCAAGAGCTTGGAAAGATGGTTCCTGGTGGACCAAAGATGAACACAGCTGAGATGCTTCATGCAGCTGCAAAGTATGTTAAGTACCTTCAAGCCCAAGTTGGGATGCTTCAACTCATGAAGACACTCAAGGAGGCACGTAAAGCAGCACCTCCTTCTGATAATCTACGCACTCTGATTGTTTCTCCCTTCGTTCAAGAGAAGTTGTACACGGAGGAAAGGTGCTTTGTTCCAAAGGAAATTGTCACTACTTTGACAAATCATGAGGATCTTCAATCAAGACCTACCATCCTTGAGGATCTTAAACAGCTGATTGGTACAGACATTGAGAAGAAAGCAAAACAAGAATAA 903 0.4308 MTLSTLFNWDTRHSETSSTFEEAMLEEVAAPNLQHFFPYSDEGSFCSNALFENYFDPNGGSLYPPYDPYVSLTYHDTFLTQEDYNLLPCPKRQKFSEQQQQVHSSLQELITPTIVSSSFFEGFFVPNDNACSLQAEELQQQQLFSDVPQHGTFVDLQCEKKGNERTISPQSIVARERRRKITEKTQELGKMVPGGPKMNTAEMLHAAAKYVKYLQAQVGMLQLMKTLKEARKAAPPSDNLRTLIVSPFVQEKLYTEERCFVPKEIVTTLTNHEDLQSRPTILEDLKQLIGTDIEKKAKQE 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11066g00004 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Mupr11066g00004 300 Pfam Helix-loop-helix DNA-binding domain 173 215 IPR011598 GO:0046983
Mupr11066g00004 300 SMART finulus 171 220 IPR011598 GO:0046983
Mupr11066g00004 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 225 IPR036638 GO:0046983
Mupr11066g00004 300 Gene3D - 164 234 IPR036638 GO:0046983
Mupr11066g00004 300 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 167 261 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11066g00004 Mupr-Chr11066 17467 19396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11066g00004 74 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 34.177 3.20e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11066g00004 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11066g00004 - - gmx:102665938 386.341