Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11066g00003 ATGGCACTAAACGCGCACTTCAACTGGGATACACTTCAAATTCCAAACTCAGAAACAAGCACCTTCCATGAAGCCATGCCTGAAGAAGTAGTAGTACCAAACCTTCGGCACTCTTTTCCCTACTCAGACGAGAGCTTGTTCCATTCAAATGCATCTTTTGAAAACTATTTTGACCCAACCGGTGGTTTTTTCTACCCTCCTTATGATCCATACATTTCACTCAATCAATGTAACATATTCCCAACTCATGAAGATTACAGTCTTCTCCCATGCTCAAAACGCCAAAAATGTTCCTATGAAGAGCAAGAACAACAACAATTGCACTCTTTACTGCAAGAACTTATTACTACACCAACACCATCCAATTTCTTAGAAGAGTTTGTTGTGCCTTGTGATAATTGTTGCTCCTTGCAAGCAGAGGAACTGATGCAACAACAACAACTCTTCTCTGAGGTTCCACAACACGGTACTTACGTAGATCTTCAGCATGAGAAGCAAGGCAACGAGAGAACCATATCTCTGCAGAGCATAGCGGCAAGAGAAAGGAGAAGAAAGATAACAGAGAAGACTCAAGAGCTTGGAAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCTGAGATGTTTCATGCAGCTGCAAAGTATGTTAAGTACCTTCAAGCCCAAGTTGGGATGCTTCAACTCATGAAGACACTCCAGGAAGATAAAGCTGCGCCTCCTGAAAATCTACACGCTCTGATCATTTCTCCCTTTGTTCAAGAGAAGTTGTACATGGAGGAAAGGTGCTTTGTTTCAAAAGAATTTGTCACCACTTTGACAAATCATGAGGATGTTCAATCAAGACCTAACATACTTGAGGATGTTAAACAGCTGATTGGGACAGACATTGAGAAGAAAGCAAAGCAAGAATAA 912 0.4156 MALNAHFNWDTLQIPNSETSTFHEAMPEEVVVPNLRHSFPYSDESLFHSNASFENYFDPTGGFFYPPYDPYISLNQCNIFPTHEDYSLLPCSKRQKCSYEEQEQQQLHSLLQELITTPTPSNFLEEFVVPCDNCCSLQAEELMQQQQLFSEVPQHGTYVDLQHEKQGNERTISLQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMFHAAAKYVKYLQAQVGMLQLMKTLQEDKAAPPENLHALIISPFVQEKLYMEERCFVSKEFVTTLTNHEDVQSRPNILEDVKQLIGTDIEKKAKQE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11066g00003 303 CDD bHLH_AtbHLH_like 175 227 IPR045239 -
Mupr11066g00003 303 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 175 268 IPR045843 GO:0003700|GO:0006355
Mupr11066g00003 303 SMART finulus 176 225 IPR011598 GO:0046983
Mupr11066g00003 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 231 IPR036638 GO:0046983
Mupr11066g00003 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Mupr11066g00003 303 Gene3D - 170 238 IPR036638 GO:0046983
Mupr11066g00003 303 Pfam Helix-loop-helix DNA-binding domain 178 220 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11066g00003 Mupr-Chr11066 12541 14296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11066g00003 117 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 42.021 3.29e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11066g00003 HLH 5.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11066g00003 - - gmx:102665938 423.32