Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11063g00005 ATGTCGTGGGTGTATGTTAAGGCTCAGAAGTCAAAGGCCTACTTCAAGAGATATCAAGTAAAGTTTAAGAGAAGAAGAGAGGGAAAGACTGATTACCGAGCCAGGATTCGCTTGATTAACCAGGACAAAAATAAGTATAACACACCCAAATATCGCTTCGTGACAAACAAGGACATTATTGCTCAAATAACATCTGCTAGCATTGCTGGTGACGCTGTTCTTGCTGCAGCGTACTCACACGAACTGCCGCACTATGGTCTTGAAGTAGGCCTTACAAATTATGCTGCAGCCTACTGCACTGGACTCCTATTGGCTCGCCGAGTTCTTAAAAAGCTTGAATTGGATGAGGAGTACGAGGGTAATGTAGAGGCTACTGGAGAGGATTTTTCAGTTGAACCTGCTGAGACCCGGAGGCCTTTCCGAGCTCTCCTTGATGTTGGTCTTATTAGAACTACAACTGGCAATCGTGTCTTTGGTGCCCTCAAGGGTGCTTTGGATGGGGGTCTGGATATTCCTCACAGTGATAAAAGGTTTGCTGGTTTTGACAAGGAGAAGAAAGAGCTAGACCCTGAGGTTCACCGCAAATACATCTTTGGTGGACACACTTTGATGGAAGATGAACCGGAGAAATACCAGTTACAATTCAGTGATTATATCAAGCGCGGACTAGAGGCTGATGGACTTGAGGAGCTATACAAGAAGGTTCATGCTGCCATTCGTGCAGACCCCACAGTGAAGAAGTCTGAGAAGCAGCCACCCAAGGAGCACAAGAGGTACAACTTGAAGAAGCTCACCTACGAGGAGAGGAAGGCGAAGTTGATTGCACGCTTGCAGGCTCTCAATTCCGCAGCTGGAGAAGATGATGACGATGATGAGGTATACCTAATGAAGTCAAAGCTTCTGAATTATGAAAAGCACAAAGAAAAATCTTCTGGCGAATATTTGGAGCATAGTGGTGTTTCTCGTCATTGCGTTGGTCACAATCCGTGTAATATGGACAATTTCAAGACCTACAAAACCATTCTTCATCCTCAATGA 1038 0.4509 MSWVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVTNKDIIAQITSASIAGDAVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLELDEEYEGNVEATGEDFSVEPAETRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDPEVHRKYIFGGHTLMEDEPEKYQLQFSDYIKRGLEADGLEELYKKVHAAIRADPTVKKSEKQPPKEHKRYNLKKLTYEERKAKLIARLQALNSAAGEDDDDDEVYLMKSKLLNYEKHKEKSSGEYLEHSGVSRHCVGHNPCNMDNFKTYKTILHPQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11063g00005 345 FunFam 60S ribosomal protein L5 3 284 - -
Mupr11063g00005 345 PANTHER RIBOSOMAL PROTEIN L5-RELATED 5 283 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 16 174 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 Hamap 50S ribosomal protein L18 [rplR]. 16 239 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 Pfam Ribosomal L18 C-terminal region 228 281 IPR025607 -
Mupr11063g00005 345 PRINTS Ribosomal protein L5 signature 83 103 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 PRINTS Ribosomal protein L5 signature 163 182 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 PRINTS Ribosomal protein L5 signature 22 41 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 PRINTS Ribosomal protein L5 signature 143 162 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mupr11063g00005 345 Coils Coil 263 283 - -
Mupr11063g00005 345 CDD Ribosomal_L18_L5e 43 169 - -
Mupr11063g00005 345 Gene3D - 3 284 - -
Mupr11063g00005 345 SUPERFAMILY Translational machinery components 13 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11063g00005 Mupr-Chr11063 26311 29156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11063g00005 3 285 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 79.110 4.14e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11063g00005 K02932 - qsa:O6P43_033473 511.531