Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11062g00003 ATGGTTTCCCGGGAAAACACCAATTGGCTCTTCGATTACGGTTTGATCGACGATATTCCTGTTCCCGATGCCACCTTCACCGTCCCTTCCTCCGCCTTCACATGGCCCCCCAACACCGCAAATGTCGGTGTTGATATCGATGGCTCATTGGGGGATTCTGATGGTCTCAAAGAGTCTGGTTCAAAGAAGAGGGTGAGGTCTGAGTCATGTGCTGTTTCTAGCTCCAAGGCATGTCGGGAGAAGTTGCGAAGAGATAGGCTTAACGACAAGTTTGTTGAATTGGGCTCCATTTTGGAGCCTGGAAGGCCTACCAAAACGGACAAGGCTGCTATCCTGATTGATGCTGTCCGAATGGTGACCCAGTTACGGGGTGAAGCCCAGAAGTTGAAAGACAATAATCAGGGTCTTCAAGAAAAGATTAAAGAGCTAAAGGCTGAGAAGAATGAACTTCGAGATGAGAAACAGAGGCTCAAGGCAGAGAAGGAGAAGTTGGAGCAGCAGCTGAAGTCTTTGAACGCACAACCTAGTTTCATGCCTCCCCCTGCTGCAATCCCCGCTGCATATGCAGCGGCACAAGGCCAAGCCCATGGCAACAAGTTGGTACCTTTTATTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTGGATACCTCACAGGATCACGTTCTCCGTCCACCAGTTGCCTAA 702 0.4972 MVSRENTNWLFDYGLIDDIPVPDATFTVPSSAFTWPPNTANVGVDIDGSLGDSDGLKESGSKKRVRSESCAVSSSKACREKLRRDRLNDKFVELGSILEPGRPTKTDKAAILIDAVRMVTQLRGEAQKLKDNNQGLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKSLNAQPSFMPPPAAIPAAYAAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11062g00003 233 FunFam Transcription factor bHLH34 62 120 - -
Mupr11062g00003 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 122 IPR011598 GO:0046983
Mupr11062g00003 233 PANTHER BHLH TRANSCRIPTION FACTOR 3 233 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Mupr11062g00003 233 Pfam Helix-loop-helix DNA-binding domain 75 122 IPR011598 GO:0046983
Mupr11062g00003 233 Gene3D - 74 151 IPR036638 GO:0046983
Mupr11062g00003 233 CDD bHLH_AtILR3_like 76 151 - -
Mupr11062g00003 233 Coils Coil 119 174 - -
Mupr11062g00003 233 SMART finulus 77 128 IPR011598 GO:0046983
Mupr11062g00003 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11062g00003 Mupr-Chr11062 15203 18956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11062g00003 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 69.456 5.80e-114 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11062g00003 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11062g00003 - - gmx:100788858 370.933