Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11061g00004 ATGGAGTCTGAGAGAGATCGCAGGACAGATGCTCTTGGAGATCTTCGAGTCCTTCCCGACGAAATCCTCTGCGCTATTTTGGAACGTCTCACTCCCCGAGATGCTGCTCGCGTAGCTTGCGTTAGCAGTGTCATGTACATACTGTGCAATGAAGAACCACTGTGGATGAGTCTATGCCTAAAAGGAGCATCTGGTTTGGTTCAATACAGAGGCTCGTGGAAGAAAACTGTCCTGCATAAGTATGTTTCTCCCCATATGCAATTGCTGTCTCTATTTAATGTTAACGTATTTGGAACTGGGCATTTTGAATGCAGTGAGAATCTGCCAGACAAATATATAGAGTACCATAGAGGACCTTTAAATTTTGATGGTAAAAGTTCTAATACTACAAGCCTCTTATCTATCTTCTATTTTCCGGGCAAAATCATACATAAGACTTTTCTGAGATTATACCGCTGTCATACCACATTGGATGCGTTTTATGCAGATACCGGAAATGTGCAAAGAATAAAAGACATCTCACTAGAGGACTTCTACAATGAGTATGATGCTAAGAAACCGGTTATGCTTTCTGGATTGGCTGATACATGGCCTGCCAAACATAAATGGACAACTGATCAGCTGTTGATAGACTATGGAGATGTAGCATTTAAAATTTCTCAGAGGAGTTTCCGGAAGATCTCCATGAAGTTCAAGGATTATGTCTCGTACATGAAAATTCAGCATGATGAAGATCCCTTGTATATTTTTGATGAGAAGTTTGGTGAAGCTGCACCTAGCTTATTGAAGGATTATGGTGTGCCTCATCTTTTCCAAGAAGACTTCTTTGATATCTTAGATACCGATAAACGGCCATCCTATAGGTGGTTCATAATAGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGTGCATGGAATACTCTTCTTTGTGGCCGTAAAAGGTGGGCATTATATCCTCCAGGAAAAGTGCCTTTGGGTGTGACAGTGCATGTTAATGAAGAAGATGGTGATGTCAATGTTGAGACCCCATCATCACTGCAGTGGTGGCTAGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAAACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTGCTAAATTTGGAAACAACTATTGCTGTCACGCAGAATTTTGTGAATTCCAACAACTTTGAATTTGTATGTTTAGATATGGCACCTGGTTATCATCACAAAGGAGTTTGCCGTGCTGGGTTGCTTGCTCTTGATGAAGATAGTTATGAAAATGTCAGACAGAGTGCATCATGTAATGAAAAGGACACGACTTACTCTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTCAGAAAGATGTAGATGATCTATATTATGAAGGAGCCATAAATGATGTATCTAGAAGCTACAATTTATGGAAAGAGGGATTTTCCTATGATATAAACTTCTTATCCAAGTTTTTGGATATTGACAGAGACCACTATAGTTCCATGTGGAGCTCAGGCAATAGCATTGGTCAGCGAGAACTAAGAGAATGGTTATCCAAGCTCTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGTATTGCACTAAATGCGAACAAGTGGTTAGAATGCCTATCAAAAATTTGTGCGTTCCATAATTTGCCCCCTCCTACTGACGATGAAAGGCTTCCAGTTGGTACGGGTAGCAATCCTGTTTATTTAGTGGGGAACTCTGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCTTCACTTTATGGATTAGGCACAGAGCTAGAGTTTCACTGTCTGTTGCATGAAGCCAACTCCCCTCTCAGTGAACATATTCCTAATGTTTTGGCCTGTGGGATTATTTATCTTGAAAATGGATCTTATACCAATTTAAGTTGGGATGGAAAAGGAGTTCCTGATATCATTGTGAAGAACAATCTGGCCGGGAAGAAATGCAACAGTGATGGTTTCTCATTTGATGTATGGGGCAAGAAACAGTTAGAGTATAGGAATGCTGGGATGCCAGTGAATGGATCAGTAGCTGGTCACTCTAGCATATGGCCATATATGATAACAAAACGATGTGAAGGGAATATGTTTGCAGAATTAAGAGACAAACTAACATGGGAAGATATAACAAACTTGGCCTCCTTCTTGGGGGAGCAGCTGCGCCACCTTCATCTTTTGCCATATCCACCTCTAAATATTTCATCTTTCTCTGATATTGAACATGAATTAGGCTTGGCTGTCGCTAATGGTTGTATTACAACTGTTAACTGTAAATCTAATGCTGCAGCAGAATGGGGGCTCTTCACCAGAACCTTAACAAAGATGAGGAAGGATGTGTCAAGCCGTTTGACCAAGGGAGATCCAATTCCTAGCAAACTAATAGAGAAAATTGATGAATATATCCCACCTGATTTTGCTAAGCTGCTAAATATAACTGAGAATTTTGGAAATGGTGCTTGTAAACCTTGCTCCTGGATACACACTGACATTATGGATGATAACATTTACATGAAACCATCATTGGTTTGCTCTACCACCAGCGGGAATACTGAAGATACCACCATGGTGGACAATGGTTTATTGAGTAATTATGAAGTAAAGTCATGGTGTCCTAGTCATATTATTGATTTTAGTGATCTTTCAATAGGTGATCCTCTTTTTGACTTGATACCAATTTATTTAGATGTGTTTAGAGGTGATTCTTATCTCCTCAAGAAGTTTCTAGAAAGTTACAGACTTCCTTTTGCTAGTAACATATCAGGGTATGAGTCAACAGAGGGTGGTCCAAAGTTTGGCCGACTTTCATATGTTGCCATGTGCTATTGTATCTTGCATGATGACAATGTGTTGGGAGCAGTATTTAGCATATGGGAAGAACTGAGATCAGCAAAGTCATGGGAAGAAGTTGAACTCACAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTCCGTGA 3021 0.4035 MESERDRRTDALGDLRVLPDEILCAILERLTPRDAARVACVSSVMYILCNEEPLWMSLCLKGASGLVQYRGSWKKTVLHKYVSPHMQLLSLFNVNVFGTGHFECSENLPDKYIEYHRGPLNFDGKSSNTTSLLSIFYFPGKIIHKTFLRLYRCHTTLDAFYADTGNVQRIKDISLEDFYNEYDAKKPVMLSGLADTWPAKHKWTTDQLLIDYGDVAFKISQRSFRKISMKFKDYVSYMKIQHDEDPLYIFDEKFGEAAPSLLKDYGVPHLFQEDFFDILDTDKRPSYRWFIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYHHKGVCRAGLLALDEDSYENVRQSASCNEKDTTYSDLSRKEKRAKTQKDVDDLYYEGAINDVSRSYNLWKEGFSYDINFLSKFLDIDRDHYSSMWSSGNSIGQRELREWLSKLWIQKPKMRELIWKGACIALNANKWLECLSKICAFHNLPPPTDDERLPVGTGSNPVYLVGNSVVKIFVEGGLEASLYGLGTELEFHCLLHEANSPLSEHIPNVLACGIIYLENGSYTNLSWDGKGVPDIIVKNNLAGKKCNSDGFSFDVWGKKQLEYRNAGMPVNGSVAGHSSIWPYMITKRCEGNMFAELRDKLTWEDITNLASFLGEQLRHLHLLPYPPLNISSFSDIEHELGLAVANGCITTVNCKSNAAAEWGLFTRTLTKMRKDVSSRLTKGDPIPSKLIEKIDEYIPPDFAKLLNITENFGNGACKPCSWIHTDIMDDNIYMKPSLVCSTTSGNTEDTTMVDNGLLSNYEVKSWCPSHIIDFSDLSIGDPLFDLIPIYLDVFRGDSYLLKKFLESYRLPFASNISGYESTEGGPKFGRLSYVAMCYCILHDDNVLGAVFSIWEELRSAKSWEEVELTVWGELNNYKGFP 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11061g00004 1006 FunFam F-box protein At1g78280 147 404 - -
Mupr11061g00004 1006 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 607 - -
Mupr11061g00004 1006 SUPERFAMILY Protein kinase-like (PK-like) 706 936 IPR011009 -
Mupr11061g00004 1006 SMART cupin_9 256 414 IPR003347 -
Mupr11061g00004 1006 Pfam Cupin-like domain 184 406 IPR041667 -
Mupr11061g00004 1006 SUPERFAMILY Clavaminate synthase-like 161 411 - -
Mupr11061g00004 1006 Pfam F-box-like 17 61 IPR001810 GO:0005515
Mupr11061g00004 1006 SMART fbox_2 18 58 IPR001810 GO:0005515
Mupr11061g00004 1006 ProSiteProfiles JmjC domain profile. 256 419 IPR003347 -
Mupr11061g00004 1006 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Mupr11061g00004 1006 SUPERFAMILY F-box domain 6 74 IPR036047 GO:0005515
Mupr11061g00004 1006 Gene3D Cupin 152 404 - -
Mupr11061g00004 1006 Gene3D - 4 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11061g00004 Mupr-Chr11061 50442 61410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11061g00004 4 1002 Glycosyltransferase AT1G78280 58.358 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr11061g00004 Cupin_8 5.2e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11061g00004 - - gmx:100792541 1776.53