Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11054g00001 ATGCCTTGTTCTTCCATTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCTCTGGACCCTGCAGCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATTTGGAACTTATTGCTAGGAGCATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGATACCTTTTTTGAGGCAAGCTTCCTAAACCAGCAGAAAACCTTTATTGTCTCATTGTTGATTTCAGTACCATGGGTTGTTTTCACTGGGGGTCGTACACAACCTGGAACTACCAAGCCTGATGAGGGGGACCGCCATCCATACTCTATAATAGAGTGTGAGCCTACACGTGAAGTCATCTTACCATCTGTAATCTACATACAGAAGATTTTGCGGCGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTTATGCGAAGATTCCTTCAGTCCTTGGAGCTTTTCGAGGAAAATGAGAGGAAAAAGTTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGCTGTCTGGTCTCCCACCAGAAACTGTGTTCCAACCACTTCTTAAAGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATGACCGACTTCTTTAAGGAGTATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAACGGGGAAAAATAGAGGATAATCTTTTGGACTTTTTCCCCCCTACCAAAAGATCTAATGAAACTTTCTCTGAGCATTTCGGCAAGGAAGGATTGGTGGCCTTGGTGGAGTATAATGAAAAGAAAATCTTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGGCTGATACAGCTGAAGTCATCGAGACTGTGAAGCTGCGAGTTAGAGATGCTAAATTGCCAGACATTGAGGTGGTGCGGGTCTTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCTGGAAAAAATCAGCAACAGAATGCAAATTCAGCCCTTCGTCAGGTAAAAACTTGGGCAGAACTGTTGAATACATTCTGCACCAGTGGAAAACTTGAGCTGGAACTGATGTACAAGGTACAAATGCAATGCTATGAGGATGCTAAACTGATGAAGCTGTTCCCTGAGATTATTAGATCTCTTTATGACCAAGATGTGCTTGCTGAAGATACCATTCTTCATTGGTTTCGAAAAGGAACAAACAGCAAGGGCAGGCAAACCTTTGTGAAGGCGCTGGAACCCTTTGTTAATTGGCTGGAGGAGGCTGAAGAGGAGGATTTGAGTGTGAACCCTTCTTCCATCATCTGCAAATGCAAAGCGTCCATCCCCACCCCGCTCGACGCCGCTTACATCCGACGCGCCGCCCACCTCGCCGACAAGTCTGCCGGTTTCACCTCCCCCCACCCCAACTTCGGCTGCGTCCTCGTGGCCCCCACCGGCGCCGTCGCCGGTGAGGGCTACCTCTACGCGCAGGGCACCACCGCCGCCGAGGTGCAGGCCGTGGACGCCGCCGGCGAACGGTGCTGCGGCGCCACCGCGTACCTGAACATGGAGCCCGGCGACTGCCACGGCGACCACAGTGCCGTGTCGGCTCTGGTCCAGGGAGGGGTCGAAAGGGTTGTGATTGGAATGAGGCATCCCCTGCAACATCTCCGTGGCAATGCCGTGCGTGCACTCAGAAATCAAGGACTACTTGTTGATCTTCTCGGAGAGGATCTCACTGGTAATCTCATTGAGGATGCGCAGAAAGAGTGTCTTCTTGTTAACGCACCTTTGATTTGTAGAGCTGCATCGCGTGTTCCCTTTTCTGTTCTCAAGTATGCTATGACCCTTGATGGAAAAATTGCTGCTAGCACTGGCCATGCATCATGGATAAGCAGCAAGCAGTCTAGAAATCTAGTTTTTGAGTTACGAGGTAGAAGTGATGCTGTTATTGTGGGAGGAAATACAGTTCGAAGGGACAATCCAAGACTAACGGCCAGACATGGAGGGGGGCATATGCCAATGCGCATTGTAATGACTCAGACTCTTGATCTTCCGGAGGAAGCAAACCTGTGGGACATGTCTGAGGTTTCTACCATAGTTGTAACACAAAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCATCTAAAGGAGTTGAGGTTGTGGAGTTTGACATATTGAATCCCCGAGAAGTTATGGAGTATTTCCATGCTCGTGGTTATCTTTCAATTTTATGGGAATGCGGAGGAACATTGGCTGCATCTGCTATTTCATCTGGAGTAATTCACAAGGTTTTTGCTTTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCTCCTGTGGGTGATCTTGGGATGGTTGAGATGTCACAGGCTTTAAATCTAATTGATGTTTGCTATGAGCAGGTTGGTCCTGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGAGATGGTACCTGTAATCCCATCACTCGATGAAACTTTTGTTGTTGATCCTACTGTCTCACCATACGAGTCAAGGATCATATTTTTCTATAAAACATGGGATCCTTATGGTGTGTTGTCAAATTTCTCTCCTCATTCCATTCAAATGCCTGATGAAAATGGTGATTATGTGACTTGGTTGAGTGTTGAGCATTACTACCAGGCACACAAATTTGTTGGGGTGGATGATCCTTTGGCACAAGATTGTGTTGAAAGAATTAAATCTGCAAAAAGTCCAGAAGAAGCTGCAAGAATAGGAAGGTCAATGCAAAGGCAGAAACCTGATCTGATAAGGTCTGACTGGGAAAACATAAAGATCGATGTGATGTACAGGGCACTGAGATGCAAATTCTCAATCTACCCGCATTTGAATTCTATGCTGCTCTCTACTGCTGGTTCTGTTCTAGTTGAGGCTTCACCACATGATCTGTTTTGGGGTGGTGGCCGAGAGGGAGAAGGCTTAAACTATCTTGGCAGACTGTTGATGAAATTGAGATCAGAGTTTCTTGGGGAATCTTCATCATCAAGTGAGAGCCCTAGTTTAACTGTATAG 3036 0.4625 MPCSSIGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIARSIESSDLNFSRYGDTFFEASFLNQQKTFIVSLLISVPWVVFTGGRTQPGTTKPDEGDRHPYSIIECEPTREVILPSVIYIQKILRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFMTDFFKEYLIDNSLDDLISILKRGKIEDNLLDFFPPTKRSNETFSEHFGKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEEADTAEVIETVKLRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNSKGRQTFVKALEPFVNWLEEAEEEDLSVNPSSIICKCKASIPTPLDAAYIRRAAHLADKSAGFTSPHPNFGCVLVAPTGAVAGEGYLYAQGTTAAEVQAVDAAGERCCGATAYLNMEPGDCHGDHSAVSALVQGGVERVVIGMRHPLQHLRGNAVRALRNQGLLVDLLGEDLTGNLIEDAQKECLLVNAPLICRAASRVPFSVLKYAMTLDGKIAASTGHASWISSKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMSEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPREVMEYFHARGYLSILWECGGTLAASAISSGVIHKVFAFVAPKIIGGKNAPSPVGDLGMVEMSQALNLIDVCYEQVGPDMLISGFLQPLPEMVPVIPSLDETFVVDPTVSPYESRIIFFYKTWDPYGVLSNFSPHSIQMPDENGDYVTWLSVEHYYQAHKFVGVDDPLAQDCVERIKSAKSPEEAARIGRSMQRQKPDLIRSDWENIKIDVMYRALRCKFSIYPHLNSMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGRLLMKLRSEFLGESSSSSESPSLTV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11054g00001 1011 Gene3D - 833 1003 IPR037238 -
Mupr11054g00001 1011 SUPERFAMILY Dihydrofolate reductase-like 601 808 IPR024072 -
Mupr11054g00001 1011 Gene3D Dihydrofolate Reductase, subunit A 594 810 IPR024072 -
Mupr11054g00001 1011 NCBIfam riboflavin-specific deaminase C-terminal domain 601 807 IPR011549 GO:0008703|GO:0009231|GO:0050661
Mupr11054g00001 1011 SUPERFAMILY YbiA-like 829 998 IPR037238 -
Mupr11054g00001 1011 Pfam eIF4-gamma/eIF5/eIF2-epsilon 354 427 IPR003307 GO:0005515
Mupr11054g00001 1011 CDD W2_eIF5C_like 232 426 IPR043510 -
Mupr11054g00001 1011 SUPERFAMILY Cytidine deaminase-like 448 568 IPR016193 GO:0003824
Mupr11054g00001 1011 ProSiteProfiles W2 domain profile. 262 430 IPR003307 GO:0005515
Mupr11054g00001 1011 Gene3D - 260 429 - -
Mupr11054g00001 1011 CDD Riboflavin_deaminase-reductase 452 564 - -
Mupr11054g00001 1011 Coils Coil 137 157 - -
Mupr11054g00001 1011 SMART 542_3 341 426 IPR003307 GO:0005515
Mupr11054g00001 1011 CDD NADAR 841 993 IPR012816 -
Mupr11054g00001 1011 NCBIfam conserved hypothetical protein 842 995 IPR012816 -
Mupr11054g00001 1011 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 6 67 - -
Mupr11054g00001 1011 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 446 568 IPR002125 -
Mupr11054g00001 1011 Gene3D Cytidine Deaminase, domain 2 443 574 - -
Mupr11054g00001 1011 FunFam Swarming motility protein ybiA 835 1000 - -
Mupr11054g00001 1011 Pfam NADAR domain 843 996 IPR012816 -
Mupr11054g00001 1011 NCBIfam bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 453 806 IPR004794 GO:0008835|GO:0009231
Mupr11054g00001 1011 SUPERFAMILY ARM repeat 269 424 IPR016024 -
Mupr11054g00001 1011 FunFam ARM repeat superfamily protein 259 427 - -
Mupr11054g00001 1011 Pfam RibD C-terminal domain 604 806 IPR002734 GO:0008703|GO:0009231
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11054g00001 316 423 Eukaryotic Initiation Factors Gene Family AT2G34970 32.727 1.37e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11054g00001 K11752 - gmx:100801283 1058.13