Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11048g00001 ATGCAGCTCGGAGACACATCAGTGTTAGAAACCTCCTCCGGGGAGGCCGTGGCGGCGCATGACGGTGGCGAGGTCATTATGGTTGATGCAAATTCTGGTGAAGACAAGGGAAAGGAGGGTGCTGGAGACGAAGAAGCTGACAAGATCAACAACTCATGTGGCGGAAACAGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCCGATATGGATGCTGTATTTCGAGATTCAAGTCTTAAGGGTCCACTTTGGGAACAAGTTGCAAGGAAACTAGCAGAACTGGGTTACCAGCGAAGCGCAAAGAAGTGCAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAAAGAACCAAAGAGGGAAGAAGTGGAAAACACGAAGGAAAAGCCTACAAGTTTTTTGATCAATTACAAGCCCTTGAGAACCAATTCACAGTCTCTTACCCGCCAAAACCACAACCTACTTTGGCAACAACAAACACAGTGGCATTAATACCACCCCCACCAAGGCCTAGTGACACAACACCAATCTCTTATGTCACTGCCACTGTTCCATCCACAAACCCTACTGTCATATCTCCTTCACCACCACCACTAACCAATGGCGCCACCACCATCACTTCTCCAACGGTAGTAACCAACCCTAGAAACCCTCCACAACCCAATAACATCACATACTCTTTGCCCAACATGAACAACCTCTTCTCCACCACTTCAACCTCTTCTTCCACGGCCTCGGACGAAGACTTGGAAGAGAAGTACCGGAAGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACGAGGCAGGTCTTGGCCAAGCAAGAGGAAATGCAAAAGAGGTTCTTGGACGCCATAGACAAAAGGGAGAGAGAACACGTGGCACAACAAGAGACTTGGAGGAGCCAAGAAATGGAAAGGATCAATAGAGAACACGAACTTCTTGTCCAAGAAAGATCATCTGCAGCAGCGAAAAATGCAGCAGTTATTGCTTTTTTGCAACAGTTATCTGGTCAGCACCAAAATCCCACAACACAAGCTGGTGCCAATTTCCTCCAACCACCACCACCACCACCTCCTCCACATGTGTCACAAGTACAACCACCACAACAACAAGCTCCACAAACACCATTGGTGATGTCAAATAATAACAATAACAATGTTGAAATTCAGAAAATGAATAATGGTCACAGTACTGGTGCTGTTACTCCTGCTTCTGCTACTACTGTTACTTCATTGAGCTCTTTATCTTCTTCTAGGTGGCCAAAGGCAGAAGTTCATGCTTTGATAAGGTTGAGGACTAGTCTTGAGACAAAGTACCAAGAAAATGGACCAAAGGCTCCACTGTGGGAGGATATATCAGCGGGAATGTTGAGGCTCGGGTACAACAGGAGTTCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAAAGCAACAAGAATAGGCGTGAGGATAGTAAAACGTGTCCCTATTTTCATGAACTTGAAGCTTTATACAAAGAAAAGAGCAAAACTCAAAACCCCTTTGGTGCTTCATTCCACAACATGAAGCCGCATGAGATGATGGAGCCCTTGATGGTGCAACCGGAGCAGCAATGGAGACCTCCCTCGCAATACGAACAAGGTGTGGTGAAGGAGAATGATGAGAGAAAAGAAAGAGAAGGGGAAGAGGAAGAAGATGAAGAAGAGGAGGAAGAGGAGGATAATGAAGAGGGAGATCTAGAAAGCGTGGAAGATGAAGGAGGTAGCCGTTATGAGATTGCGACAAATAAACTTTCTTCAGTGGACACCGTTGAATGA 1830 0.4601 MQLGDTSVLETSSGEAVAAHDGGEVIMVDANSGEDKGKEGAGDEEADKINNSCGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEQVARKLAELGYQRSAKKCKEKFENVYKYHKRTKEGRSGKHEGKAYKFFDQLQALENQFTVSYPPKPQPTLATTNTVALIPPPPRPSDTTPISYVTATVPSTNPTVISPSPPPLTNGATTITSPTVVTNPRNPPQPNNITYSLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLDAIDKREREHVAQQETWRSQEMERINREHELLVQERSSAAAKNAAVIAFLQQLSGQHQNPTTQAGANFLQPPPPPPPPHVSQVQPPQQQAPQTPLVMSNNNNNNVEIQKMNNGHSTGAVTPASATTVTSLSSLSSSRWPKAEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRLGYNRSSKRCKEKWENINKYFKKVKESNKNRREDSKTCPYFHELEALYKEKSKTQNPFGASFHNMKPHEMMEPLMVQPEQQWRPPSQYEQGVVKENDERKEREGEEEEDEEEEEEEDNEEGDLESVEDEGGSRYEIATNKLSSVDTVE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 31 46 - -
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 352 369 - -
Mupr11048g00001 609 CDD GT1 56 121 - -
Mupr11048g00001 609 FunFam Trihelix transcription factor GT-2 58 119 - -
Mupr11048g00001 609 Coils Coil 554 590 - -
Mupr11048g00001 609 Gene3D - 423 484 - -
Mupr11048g00001 609 Gene3D - 58 119 - -
Mupr11048g00001 609 CDD GT1 422 486 - -
Mupr11048g00001 609 SMART sant 419 481 IPR001005 -
Mupr11048g00001 609 SMART sant 54 116 IPR001005 -
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 341 382 - -
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 563 587 - -
Mupr11048g00001 609 Pfam Myb/SANT-like DNA-binding domain 56 142 IPR044822 -
Mupr11048g00001 609 Pfam Myb/SANT-like DNA-binding domain 421 508 IPR044822 -
Mupr11048g00001 609 ProSiteProfiles Myb-like domain profile. 56 114 IPR001005 -
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 541 609 - -
Mupr11048g00001 609 ProSiteProfiles Myb-like domain profile. 415 479 IPR001005 -
Mupr11048g00001 609 MobiDBLite consensus disorder prediction 1 55 - -
Mupr11048g00001 609 PANTHER FI21293P1 32 569 - -
Mupr11048g00001 609 FunFam Trihelix transcription factor GT-2 423 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11048g00001 Mupr-Chr11048 23893 26489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11048g00001 50 543 Trihelix Transcription Factor Family AT1G76880 47.909 2.59e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr11048g00001 Myb_DNA-bind_4 2.9e-21 CL0123