Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1102g00003 ATGGACGACATGGAAGACGACGCGCGGTATCCTCCGAAGTCCTTCTCCCTCAACCGCCAGAACCCTTCCCACCGCCACAAACACCCCATTCGCGCCGCCCCCTACCAGCGCCCAATGCCCACGCGCTACGAGGAGGTCCCCGACGACGACGACGACGACGAGCCCGAGGATTTCGACGAAGACGAAAACGACGACGACGAAGGCGAGAACGGCTACGACGCGACCATGATGGAGGAAAATGACGTCGTCGGGTACCCTCGGATCCCGAAGAAGCGCAAGGTGGCAGTCGGAGGAGGAAGCTCCTACGAGTTCGCGCCACGTGTCAAATTCCCGTACGGGACCCGCGGTTCGGGTTCCGGTTCGGGCGAGGAGTGGAACGAGCACGAGACCTTCGTTCTGTTGGAGGTTTGGGGGGACAAGTTCCTCCAACTCGGGAGGAACAGCTTGAGGTCCGAGGAGTGGCACGAGGTTGCGGAGAAGGTTTCCGAGGAATTAAAGGTTGAGAGAACAGTTACGCAGTGTAGGAGCGTCTTGGATAAGCTCAAAAGAAGGTACAAAAAAGAGAAGGCTAGGATGGATGAAATGGGCCTGGGCTCTTGCAAATGGGCCTATTTCAAGAAGATGGACATGTTGATGGCTTCCTCCGCAAGGCAAGAGTATGGGCTTGCCTGCGGGGTGGATTCTGGGGAGTATGTGTTTATGAATACTAGGGTTTATTTGAACAGTTCCAATGGGTTTGATGAGATGAGAGACAGTCCTGGTGAGTCTGAGAGTGATGATGATGATGATGATGATGAGTGTGGTGGTGATGAGGAGGACGAGACATCGTATCGTGTTTTGGCCGATTCCATTCAGAAGTTTGGGAAAATATATGAGAAGATTGAGAATAGCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTCGATTTTAATAGGGAATTGGAGCTGCAGAAGAAGCACATTCTCGAGAGGGCTCAGGCTGAAATTGCCAAAATACAGGAAGGTGATGAAGAGGGTACTGACACTTCCGGGGAGAATCTCACAGACATCAGTCCTCAAGAAGCAAAAGATGTGATGACCGATACGGTTTGTTTAATTAGGAGATATAATCTTGAAAAGGGTGGTGATATCTGGATAGAGTGCACCAGTTTTGGAGGAAAGATTGTCTACAAGCTGAGGGAGATACCATTGGCAGCACTAAACGATGGTACTATTCACGGCCCGAATGGTCCTTTATTCTTTCGCGTACTTGTTAAAACCGGAATGACTGAATTCGACGATTCTGAAAATGGTGAAGACCAAACAATTGGTTGA 1320 0.5083 MDDMEDDARYPPKSFSLNRQNPSHRHKHPIRAAPYQRPMPTRYEEVPDDDDDDEPEDFDEDENDDDEGENGYDATMMEENDVVGYPRIPKKRKVAVGGGSSYEFAPRVKFPYGTRGSGSGSGEEWNEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKVERTVTQCRSVLDKLKRRYKKEKARMDEMGLGSCKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNSSNGFDEMRDSPGESESDDDDDDDECGGDEEDETSYRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKHILERAQAEIAKIQEGDEEGTDTSGENLTDISPQEAKDVMTDTVCLIRRYNLEKGGDIWIECTSFGGKIVYKLREIPLAALNDGTIHGPNGPLFFRVLVKTGMTEFDDSENGEDQTIG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1102g00003 439 MobiDBLite consensus disorder prediction 1 74 - -
Mupr1102g00003 439 MobiDBLite consensus disorder prediction 244 275 - -
Mupr1102g00003 439 Coils Coil 291 311 - -
Mupr1102g00003 439 Gene3D - 125 187 - -
Mupr1102g00003 439 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 113 338 IPR044823 -
Mupr1102g00003 439 MobiDBLite consensus disorder prediction 45 74 - -
Mupr1102g00003 439 Coils Coil 171 191 - -
Mupr1102g00003 439 MobiDBLite consensus disorder prediction 253 272 - -
Mupr1102g00003 439 Pfam Myb/SANT-like DNA-binding domain 124 210 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1102g00003 Mupr-Chr1102 18978 23046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1102g00003 125 347 Trihelix Transcription Factor Family AT1G54060 31.022 4.10e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr1102g00003 Myb_DNA-bind_4 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1102g00003 - - gmx:100790166 543.502