Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11005g00001 ATGGCACCAAGTGAGATTGAGAAAAGTGGCGAGGAGGAAGTGCATTATCGCGGAGTGAGCAAAAGGCCTTGTGGCACGTACGCCGCAAAGATCAGAGATCTCCACAAGAAGAAGCGTGTGTGGTTAGGCACCTTTAGCTCCGCCGTGGACGCCGCCAAGGCCTACGACGCCGCCGCCATCGAGCTCCGTGGCCCTCACAAGGCCAAAACCAACTTCCCTATCCCTAATAACCTTATTAACCACCACAACAACAACGCGATTCACTCCTCAACAGCGACAAACCCTCCCCCGCACGTGCCTTTGACCAACCATGTCACGTGTCATCACCAAAGCCACTCTAGTTCCTCCTCCGCTGCTAGTGTTGAAAAGAAGGTTGTGCTTGAATTTGATCTTAACCAGTCTCCTCCCCGTCTACGACAGTTCAACGGGGTGGGACTGTAG 441 0.5374 MAPSEIEKSGEEEVHYRGVSKRPCGTYAAKIRDLHKKKRVWLGTFSSAVDAAKAYDAAAIELRGPHKAKTNFPIPNNLINHHNNNAIHSSTATNPPPHVPLTNHVTCHHQSHSSSSSAASVEKKVVLEFDLNQSPPRLRQFNGVGL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11005g00001 146 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Mupr11005g00001 146 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 117 - -
Mupr11005g00001 146 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
Mupr11005g00001 146 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11005g00001 Mupr-Chr11005 3184 3755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11005g00001 12 110 AP2-EREBP Transcription Factor Family AT5G44210 48.544 1.36e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr11005g00001 AP2 5.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11005g00001 K09286 - sly:101249381 84.3445