Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10g00001 ATGAGTATAAACTCTAGTTGTAGCATAAGTGGTGGAAACAACAATAGTGGTGGCAACAACGGTGGTAGCCCTTGTGGTGCGTGCAAGTTTTTGAGACGAAAGTGTGTACCGGGTTGCATTTTTGCTCCATACTTTGATTCGGAGCAAGGGGCCACACACTTTGCCGCAGTGCACAAGGTTTTTGGTGCAAGTAACGTTTCCAAGTTACTCCTTAACATTCCGGTGCACAAGAGGCTCGATGCGGTGGTCACAATTTGTTATGAAGCACAGGCACGGCTTAGAGACCCCGTGTATGGTTGTGTTGCTCATATCTTCGCCCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAACTTTCCTACTTACAAGGGCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCACCTTCTTCTCCACAAGCAACCATGGCACCTCCAGTGATATCAATAGCTGACCTCCCATCATCAGCCTCTACCGGGCCAGTCACATATGACCTCTCTTCACTCTTTGATCCAATGGCCCAGACTCCTTCATGGGCCGTGCAGCCCAGGTCCATAGACTCACGCCAATATGTGGGTAGTAGTGGCACATCACCCACTAGTGCTAGTGGTGGTGATCTTCAAGCATTGGCCCGTGAGCTTTTGCATAGACATGGATCTGCCTCTGTTGTTGCATGCTCGAATCCCTCCTCGTCTCACTCGCATGCCAAATGA 717 0.5007 MSINSSCSISGGNNNSGGNNGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPSSPQATMAPPVISIADLPSSASTGPVTYDLSSLFDPMAQTPSWAVQPRSIDSRQYVGSSGTSPTSASGGDLQALARELLHRHGSASVVACSNPSSSHSHAK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10g00001 238 MobiDBLite consensus disorder prediction 190 209 - -
Mupr10g00001 238 MobiDBLite consensus disorder prediction 190 206 - -
Mupr10g00001 238 MobiDBLite consensus disorder prediction 224 238 - -
Mupr10g00001 238 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Mupr10g00001 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 144 - -
Mupr10g00001 238 MobiDBLite consensus disorder prediction 219 238 - -
Mupr10g00001 238 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10g00001 Mupr-Chr10 7870 11435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10g00001 27 221 AS2 family AT2G45420 65.700 4.35e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr10g00001 LOB 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10g00001 K21994 - gmx:100779541 367.081