Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr109g00001 GTGTCGAATTCAGCGCGTGAGAGTAAGAATGCCTTGGGGAGCGTGGAAGGAATTTCGGAGGAGATTAGGATTATTGAAAGCACTAGTGTTAATGGAGGAAGCAACAGTGTGTTTCCGAGTGTGGAAATGCCAAAGTTGAAGGAGTTCAATTTTGCGGATCTGAAAAGCGCCACCAAGAGTTTCAGGTCGGAGGCATTGCTTGGTGAAGGAGGTTTCGGCAAAGTATACAAAGGATGGTTGCATGAGAAGACACTCACACCCACCAAACCTGGTTCTGGAATCACGGTTGCCATCAAAAAATTGAATCCCGAAAGCATGCAGGGCCTTCAAGAGTGGCAGTCTGAAATCAATTTTTTAGGAAGGATTTCTCACCCAAACCTGGTCAAGCTATTGGGATATTGTTGTGATGATATGGAATTTCTCCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAGTCACCTCTTTAGGAAAAATACTAACGTAGAACCAATGTCTTGGGACACCCGACTCAAAATAGCTATTGGTGCTGCTCGGGGCTTGACTTTCTTGCATACCTCAGAAAAACAAATCATATACAGAGATTTCAAAGCCTCCAATATACTACTTGACGAGGATTACAATGCAAAAATTTCAGATTTTGGGTTGACAAAATTAGGGCCTTCTGGGGGAGATTCACACGTGAGTACCAGGATCATGGGCACACATGGCTATGCTGCTCCAGAATACATTGCAACAGGCCACCTGTATGTGGAGAGTGATGTTTATGGTTTTGGTGTAGTCCTGCTTGAAATGATGACAGGGATGCGGGCACTTGATAAAAACCGGCTCACAGGGCAGGAAAATCTGGTTGAATGGAAAAAGCCTTCTCTGTCTGATAAAAGAAAGTTGAAAAGCATTATGGATGAGAGGATAGAGGGTCAGTATTCAACCAAGGCAGCATTCAGAGCAGCACAGCTTACTCTAAAATGTCTTGAACCTAACCCTAAAAAACGTCCTCCTATGAAAAATGTTTTGGAAACACTCCAACGCATCGAAGCTATCAAGTGTAGAAAGAAGGAATGCAAGAGATGTTGTACTAAGTTTTCAACTATGAACAATTTCCATAGTGTTAATGGAGGAAGCAATAATAGCAATAGCAGTGTGTTTCTGAGTGTGGAAATGCGAAACTTGAAGGAGTTCAATTTTGCGGATCTGAAAGCGGCCACCAAGAGTTTCAGGTCGAATGCATTGCTAGGTGAAGGAGGTTTTGGCAAAGTATACAAAGGATGGTTGCATGAGAAGACACTCACACCCACCAAACCTGGATCTGGAATGGTCGTCGCTGTTAAGAAATTGAATCCAGAAAGTTTCCAGGGATTTCGAGAGTGGCAGTCAGAAATCAACTTTTTAGGAAGGATTTCTCACCCAAACCTGGTCAAGCTATTGGGTTACTGTTGTGATGATGTGGAATTTCTCCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAGTCACCTCTTTAGGAGAAATACTAACACAGAACCACTATCTTGGGACACCCGACTCAAAATAGCTATTGGTGCAGCTCGGGGCTTGGCTTTCTTGCACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCCAATATACTACTTGATGAGGATTACAATGCAAAAATTTCAGATTTTGGGTTGGCGAAATTAGGGCCTTCTGGGGGAGATTCACACGTGACTACCAGGATCATCGGCACACATGGGTATGCTGCTCCAGAATACATTTCAACAGTCCTGCTTGAAATGCTGACAGGGTTGCGGGCACTTGATATAAACCGCTCTACAGAGCAGCAGAATCTAGTTGAATGGGTTAAGCCTTCTCTGTCTGATAAAAGAAAGTTGAAAAGCATTATGGATGAGAGGATAGAGGGTCAGTATCCAACCAAGGCAGCATTGAAAGCAGCACAGCTCACTCTAAAATGCCTTGAACATGACCATAATAAACGTCCTCCTATGAAAGATGTTCTCGAGACATTGGAATGCATCAAAGCTATCAAGGATAGAAGGAAGGAATCTAGTGTCCAGAAAAAATCAAATCTCACCTCAACTATAAATAGTTATGCTCTTGGTATGTTGCTTTTAACGTTGGCCATAATCCCATTTGAGGGAAGTTGTGGGTCTCATCAGCGGCGTCTCCGCCGACCCCGGCACGAATCCCTTCACTTCTCGCTGTTTCAGCACGAAACCATAAACAAAACAGGATATGTGATAGTGAATGGCGTGGAAGGAGGAAAAGGAACCACTGATACTTCAATCCCTTTTGGGACAGTTTTTGTCTTTCAGGACCCTTTGACTGCCAACGCAAACAGATCCTCCAAACAGCTTGGGACTGCAGAAGGAACTTCCATCACCTCTAGTCTTGACGGGCTTAGCAGCATTTCGGTCGCAAAGCTAACACTGCGTCTGGAGAATCGCAAGGGCTCTATTTTCATTGTTGGAAGTACTAATAACATCGAGCGTTCGGATCATCCAGTTGTAGGAGGCACTGAAGATTTCTTGTTTGTGCAAGGCTATATTACCTCTTCTCCTGTTGATCTGAAGGGTCCTACA 2598 0.4388 VSNSARESKNALGSVEGISEEIRIIESTSVNGGSNSVFPSVEMPKLKEFNFADLKSATKSFRSEALLGEGGFGKVYKGWLHEKTLTPTKPGSGITVAIKKLNPESMQGLQEWQSEINFLGRISHPNLVKLLGYCCDDMEFLLVYEFMPKGSLESHLFRKNTNVEPMSWDTRLKIAIGAARGLTFLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLTKLGPSGGDSHVSTRIMGTHGYAAPEYIATGHLYVESDVYGFGVVLLEMMTGMRALDKNRLTGQENLVEWKKPSLSDKRKLKSIMDERIEGQYSTKAAFRAAQLTLKCLEPNPKKRPPMKNVLETLQRIEAIKCRKKECKRCCTKFSTMNNFHSVNGGSNNSNSSVFLSVEMRNLKEFNFADLKAATKSFRSNALLGEGGFGKVYKGWLHEKTLTPTKPGSGMVVAVKKLNPESFQGFREWQSEINFLGRISHPNLVKLLGYCCDDVEFLLVYEFMPKGSLESHLFRRNTNTEPLSWDTRLKIAIGAARGLAFLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGDSHVTTRIIGTHGYAAPEYISTVLLEMLTGLRALDINRSTEQQNLVEWVKPSLSDKRKLKSIMDERIEGQYPTKAALKAAQLTLKCLEHDHNKRPPMKDVLETLECIKAIKDRRKESSVQKKSNLTSTINSYALGMLLLTLAIIPFEGSCGSHQRRLRRPRHESLHFSLFQHETINKTGYVIVNGVEGGKGTTDTSIPFGTVFVFQDPLTANANRSSKQLGTAEGTSITSSLDGLSSISVAKLTLRLENRKGSIFIVGSTNNIERSDHPVVGGTEDFLFVQGYITSSPVDLKGPT 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr109g00001 866 Pfam Dirigent-like protein 737 860 IPR004265 -
Mupr109g00001 866 ProSiteProfiles Protein kinase domain profile. 61 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr109g00001 866 Gene3D Phosphorylase Kinase; domain 1 45 146 - -
Mupr109g00001 866 SUPERFAMILY Protein kinase-like (PK-like) 392 675 IPR011009 -
Mupr109g00001 866 FunFam Serine/threonine-protein kinase BIK1 30 146 - -
Mupr109g00001 866 ProSitePatterns Protein kinases ATP-binding region signature. 67 100 IPR017441 GO:0005524
Mupr109g00001 866 FunFam Lectin-domain containing receptor kinase A4.3 493 694 - -
Mupr109g00001 866 Gene3D - 720 863 IPR044859 -
Mupr109g00001 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Mupr109g00001 866 FunFam Serine/threonine-protein kinase BIK1 375 492 - -
Mupr109g00001 866 CDD STKc_IRAK 67 346 - -
Mupr109g00001 866 ProSitePatterns Protein kinases ATP-binding region signature. 413 446 IPR017441 GO:0005524
Mupr109g00001 866 ProSiteProfiles Protein kinase domain profile. 407 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr109g00001 866 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Mupr109g00001 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mupr109g00001 866 SUPERFAMILY Protein kinase-like (PK-like) 37 343 IPR011009 -
Mupr109g00001 866 FunFam Serine/threonine-protein kinase PBS1 147 361 - -
Mupr109g00001 866 Gene3D Transferase(Phosphotransferase) domain 1 147 367 - -
Mupr109g00001 866 Gene3D Transferase(Phosphotransferase) domain 1 493 704 - -
Mupr109g00001 866 Pfam Protein tyrosine and serine/threonine kinase 65 343 IPR001245 GO:0004672|GO:0006468
Mupr109g00001 866 Pfam Protein tyrosine and serine/threonine kinase 411 675 IPR001245 GO:0004672|GO:0006468
Mupr109g00001 866 PANTHER OS01G0588500 PROTEIN-RELATED 40 347 - -
Mupr109g00001 866 CDD STKc_IRAK 413 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr109g00001 Mupr-Chr109 1824 24694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr109g00001 395 702 Receptor kinase-like Gene Family AT4G02010 41.298 5.29e-77 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr109g00001 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr109g00001 - - rcn:112187249 734.561