Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10978g00001 ATGAAGGCACAAGTCAAAGCTCATGACTTGACCTGCATGAGAATTACTCCTTGGTATATATCCTTGGACTCTCTTCACACTATAATAATGGAAAGAAGCCAAAAGCAAAGCACACACAAAGAGAGAGAAGATAAGATCATGGGTGTGAACCAATATTTCAACAACAAGGATGAACATGAGCATGTGGATGATGATGATGTTCCACTTCCGGGGTTTCGATTCCACCCCACTGACGAAGAACTTGTTAGCTTCTACCTTCGAAGGAAGCTTGACAAGAAACCCATCAGCATCGAACTCATCAAACAGATTGATATCTACAAATACGATCCTTGGGATCTTCCAAAAACCAGTGCCACTGGAGGAGAGAAGGAGGGGTACTTCTTCTGCAGAAGAGGGAGGAAGTATAGGAATAGCATAAGGCCTAACAGGGTCACTGGCTCAGGGTTCTGGAAAGCAACTGGCATAGACAAGCCAGTGTACTCACATGGAGGAGAAGGCAATGACTGCATTGGACTCAAGAAAACACTGGTGTACTACCGTGGCAGTGCAGGCAAAGGCACCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCTTCTAACACAGACACCAACACAAACCTTCCCAACTCCAAGCATTATGAAGATATTCCCCAAGAAGCTGAAATTTGGACATTATGTAGAATTTTCAAAAGAAATGTGTCACAGAGGAATAAGCACACGCCAGAAATGAAACAAGTAGCTGCTAAGCGCCACTCCATTCATGACAAGAGCTCCAGAATGAGCAATGTGGAGACTAACACAAATCAAGAAGCATACATAAACTTTGGTGGCCACTGTCACAATGAGCAGAAACCCGTGATTAACTACACAAACAGTGACCAACGGAACCAGTTTCATGTGATGAGTCAGTTGTGTTCTCCAGTGGCACAGCAACCTCAACTAACTGCACCATCTTCTAACTTTTGGATTAATCCAGTTGGGAACGACTTCTTCACGTTTGATAACTGGGATGAGCTTGGATCTGTAGTGAAGTTTGCTGTTGATTCGCCTAGCTTGTAG 1062 0.4397 MKAQVKAHDLTCMRITPWYISLDSLHTIIMERSQKQSTHKEREDKIMGVNQYFNNKDEHEHVDDDDVPLPGFRFHPTDEELVSFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKTSATGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNTDTNTNLPNSKHYEDIPQEAEIWTLCRIFKRNVSQRNKHTPEMKQVAAKRHSIHDKSSRMSNVETNTNQEAYINFGGHCHNEQKPVINYTNSDQRNQFHVMSQLCSPVAQQPQLTAPSSNFWINPVGNDFFTFDNWDELGSVVKFAVDSPSL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10978g00001 353 MobiDBLite consensus disorder prediction 237 260 - -
Mupr10978g00001 353 MobiDBLite consensus disorder prediction 237 259 - -
Mupr10978g00001 353 FunFam NAC domain-containing protein 35 77 235 - -
Mupr10978g00001 353 Pfam No apical meristem (NAM) protein 70 198 IPR003441 GO:0003677|GO:0006355
Mupr10978g00001 353 Gene3D NAC domain 77 236 IPR036093 GO:0003677|GO:0006355
Mupr10978g00001 353 SUPERFAMILY NAC domain 68 232 IPR036093 GO:0003677|GO:0006355
Mupr10978g00001 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 67 282 - -
Mupr10978g00001 353 ProSiteProfiles NAC domain profile. 68 232 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10978g00001 Mupr-Chr10978 14443 16622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10978g00001 65 232 NAC Transcription Factor Family AT5G39820 60.894 1.23e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr10978g00001 NAM 9.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10978g00001 - - gmx:100790471 551.206