Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10973g00001 ATGGCTGAATTCACTGAAGATTTGCAAAGCTTTAGACCCTTGTTTCCTTTCTTAGATATTGATAACATGGAAATGCAGAACTTGATGCCATTTGACAGCTTCTTGGCCTCTCCAGAACCTGAATTTCCAGGAAACTCAGAGGAAAATTTTCCGGGCCTTGTGCAATGTGTCAATCACAATGCAGTTCCAGTTTTAGTTCCTATTAGTTCAGCTAAAAGTGAAGTCCATGAAGATAAAAAGAGGAAAGCAATTATTATATGTGAGCCAAGTTCTGCTAATTCAACTCCTGCTGTTTCTGAGAGTGGAAGCAAGACAAAAAATAGTTCTGGAAGAGGCAAGAGGGTAAAAAGGAATATAATAGGAGACAAGAAACCAAATGAAGTAGTTCATATTAGAGCCAAACGAGGCCAAGCTACTGACAGTCACAGTTTGGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAACTTAGGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAATAATGTTGGACGAGATCATAAACTATGTCCAGTCGTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTACTGCAGCAAGTACCTATTATGACTTCAATTCAGAGACAGATACTTTAGAAACAATGCAGAGAGCAAGGGAAACAGAGGCTAAAGAGTTGGGCAAGGTCATGAATGAAGGAGTTTCTTGCTTTGAACCAAGTTGGCCGTGGTCCCTGTGA 744 0.4086 MAEFTEDLQSFRPLFPFLDIDNMEMQNLMPFDSFLASPEPEFPGNSEENFPGLVQCVNHNAVPVLVPISSAKSEVHEDKKRKAIIICEPSSANSTPAVSESGSKTKNSSGRGKRVKRNIIGDKKPNEVVHIRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDFNSETDTLETMQRARETEAKELGKVMNEGVSCFEPSWPWSL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10973g00001 247 CDD bHLH_AtBPE_like 127 212 - -
Mupr10973g00001 247 MobiDBLite consensus disorder prediction 92 121 - -
Mupr10973g00001 247 Pfam Helix-loop-helix DNA-binding domain 141 188 IPR011598 GO:0046983
Mupr10973g00001 247 Gene3D - 137 200 IPR036638 GO:0046983
Mupr10973g00001 247 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 73 214 IPR024097 GO:0006355
Mupr10973g00001 247 MobiDBLite consensus disorder prediction 92 108 - -
Mupr10973g00001 247 FunFam transcription factor BEE 3-like 134 205 - -
Mupr10973g00001 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 187 IPR011598 GO:0046983
Mupr10973g00001 247 SMART finulus 143 193 IPR011598 GO:0046983
Mupr10973g00001 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10973g00001 Mupr-Chr10973 5234 6737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10973g00001 1 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 48.727 1.24e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10973g00001 HLH 0.00022 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10973g00001 - - gmx:100777160 409.068