Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10972g00001 ATGTCTTCTTCTATTATTCAAACTAGCTCTTCATCACACAACAAATGTTTTGATGTGTTTGTGAGCTTTAGAGGTGAGGATACTCGTTATGGTTTCACTGATCATCTTTTTGCAGCTCTTCGGAGGAAAGGTGTTGTTGCCTTCAGGGATGACCAAATAATCAAGAAAGGAGATCTCTTGGAACCTGACCTCTTTCAGGCAATCGAAGGATCGCGTCTTTTCATTGTTGTCTTCTCAAAGGACTATGCATCATCCACATGGTGCTTGAAAGAGCTCACAAAGATCGTTGACTTGGTTCAAGAAACAACTCGAAGTGTTCTTCCTGTTTTCTATGATGTCACTCCTTCTGAGGTCCGCAAACAGACTGGAAAGTTTGGAGAAGCTTTTGCTATACACGAAGAAAGGTTCAAAGATGATTTGGAAATGCTGCAAAAATGGAGGGAAGCTTTGAAAGCTACTACCAGTCGTTGTGGGTGGGATGTTCGTGATAAGCCACAACACACAGAAATTGAAAAAATTGTTGAAGTGGTAATCGACATATTGGGTCATAATCAAATTTTATGTTTTGAGGATGATTTAGTTGATATGCACTCTCGTGTGGAACAATTAGAAGATCTTCTAGATTTGGATGAAAATAAAGTTGTTGGAATTTGTGGCATGGGTGGAATTGGAAAGACAACACTTGCTACTGCATTGTTTAATAAAATATCTTTCCAATATGATGCTTGCTGTTTCATTGATGATGTAAGCAAAACTTTTAGGGATTCTGGACCGACAGGTGCACAAAAACAACTTCTTTATCAAGTTCTAAACCAAGGAAATATGGAGATAAACAATCTTCCCCAGGGAACTATGTTGGTAAGATCTAGACTATGTCACTTAAAGGTGCTTATTGTTCTTGATAATGTTGATCAATTTGAGCAATTGGAGAAATTGGCTTTACATCCTAAATATCTAGGTGGAGGGAGTAGAATCATCATAATATCTAGAGATAGTCACGTCTTAAGAAATTTTGGAGTAAATAAAGTTTACGATGTTCAACTCCTGAATGAGAATGTAGCTCTTCAATTATTTTGTAGAAAAGCTTTCAAATCTAATGATATTGTGAAAGGGTATGAAGAGTTGACATATGATGTACTAAAGCATGTTAATGGCCTTCCATTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGATCGAGATGTTTATGAGTGGAGAAGTGCATTGACTAGAATGAAAGAAAATCCAATCAAAGATATCATGGATGTGTTGCGAGTAAGTTTTGATGGATTAGAGGAAATGGAAAAAGAAATATTTTTAGATATTGCTTGTTTCTTTACTAAAGGATACTTCAAAAGAAAAGTAAAGAAATTTATAAGCTATCGTGGATTTTATCCTGACATTGGTATGAAAGTTCTCATTGACAAATCACTCCTACGTTATGATAAGTTTGGAGAAATTAAAGTGCATGACTTGTTGATAGATATGGGTAGAAGTGTTGTCCGAGAAAACTCACCCAAGGAGCCAAGAAAGTGGAGCAGGTTATGGGACTACAAAGATCTCCATAATGTCATGATAAAAAAGAAGGAAGCCAAAAATCTGGAAGCCATTGTCATTGAAGATTGTCCAAATGAGTTTCTAGAAACAACAATGAGGGAAAATTAA 1665 0.361 MSSSIIQTSSSSHNKCFDVFVSFRGEDTRYGFTDHLFAALRRKGVVAFRDDQIIKKGDLLEPDLFQAIEGSRLFIVVFSKDYASSTWCLKELTKIVDLVQETTRSVLPVFYDVTPSEVRKQTGKFGEAFAIHEERFKDDLEMLQKWREALKATTSRCGWDVRDKPQHTEIEKIVEVVIDILGHNQILCFEDDLVDMHSRVEQLEDLLDLDENKVVGICGMGGIGKTTLATALFNKISFQYDACCFIDDVSKTFRDSGPTGAQKQLLYQVLNQGNMEINNLPQGTMLVRSRLCHLKVLIVLDNVDQFEQLEKLALHPKYLGGGSRIIIISRDSHVLRNFGVNKVYDVQLLNENVALQLFCRKAFKSNDIVKGYEELTYDVLKHVNGLPLAIKVLGSFLFDRDVYEWRSALTRMKENPIKDIMDVLRVSFDGLEEMEKEIFLDIACFFTKGYFKRKVKKFISYRGFYPDIGMKVLIDKSLLRYDKFGEIKVHDLLIDMGRSVVRENSPKEPRKWSRLWDYKDLHNVMIKKKEAKNLEAIVIEDCPNEFLETTMREN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10972g00001 554 Gene3D - 348 432 IPR042197 -
Mupr10972g00001 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Mupr10972g00001 554 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Mupr10972g00001 554 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 537 IPR044974 GO:0006952
Mupr10972g00001 554 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Mupr10972g00001 554 PRINTS Disease resistance protein signature 290 304 - -
Mupr10972g00001 554 PRINTS Disease resistance protein signature 383 397 - -
Mupr10972g00001 554 PRINTS Disease resistance protein signature 214 229 - -
Mupr10972g00001 554 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Mupr10972g00001 554 Pfam TIR domain 17 177 IPR000157 GO:0007165
Mupr10972g00001 554 Gene3D - 182 345 IPR027417 -
Mupr10972g00001 554 Pfam NB-ARC domain 199 418 IPR002182 GO:0043531
Mupr10972g00001 554 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Mupr10972g00001 554 Gene3D - 14 181 IPR035897 -
Mupr10972g00001 554 Coils Coil 193 213 - -
Mupr10972g00001 554 SMART till_3 16 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10972g00001 Mupr-Chr10972 30 2152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10972g00001 12 540 WRKY Transcription Factor Family AT4G12020 29.213 4.04e-52 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10972g00001 - - ccaj:109792038 774.622