Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10962g00001 ATGGAAACAAAATGTTGTGAAATAGAAGGTGCTTGGTCTTCTGAGGAAGAAGAAATCCTTATCAACTACGTTCAAGTCAATGGAGAAGGAAATTGGAGAGACTTTTCCAAAAGAGCAGGTTTGAAACGGTGTGATGAAAGTTGCAAACATCGATGGCTGAACTATCTCAAGCCAGCCATCCATAGAAGAAACATTTCTCCGAAGGAAGAAGACCTAATAATCAGAATGCATAAGCTAGTGGGAAATAGGATTGATATTGATAGGCTGATTAAGTTATGGTCCATAATTGCAGGAAGGTTGCCCGGACGCACCGAAAATGAGATCGAGAACATTTGGAATAATTATTTGAGCAAGAAAGAGGAAATTAACTACTAA 375 0.3867 METKCCEIEGAWSSEEEEILINYVQVNGEGNWRDFSKRAGLKRCDESCKHRWLNYLKPAIHRRNISPKEEDLIIRMHKLVGNRIDIDRLIKLWSIIAGRLPGRTENEIENIWNNYLSKKEEINY 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10962g00001 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 60 IPR017930 -
Mupr10962g00001 124 SUPERFAMILY Homeodomain-like 10 112 IPR009057 -
Mupr10962g00001 124 SMART sant 8 58 IPR001005 -
Mupr10962g00001 124 SMART sant 61 118 IPR001005 -
Mupr10962g00001 124 CDD SANT 11 56 IPR001005 -
Mupr10962g00001 124 Gene3D - 66 119 - -
Mupr10962g00001 124 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Mupr10962g00001 124 Pfam Myb-like DNA-binding domain 64 116 IPR001005 -
Mupr10962g00001 124 CDD SANT 66 116 IPR001005 -
Mupr10962g00001 124 FunFam MYB-related transcription factor 8 61 - -
Mupr10962g00001 124 ProSiteProfiles Myb-like domain profile. 57 116 IPR001005 -
Mupr10962g00001 124 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 120 - -
Mupr10962g00001 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 120 IPR017930 -
Mupr10962g00001 124 ProSiteProfiles Myb-like domain profile. 9 56 IPR001005 -
Mupr10962g00001 124 Gene3D - 9 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10962g00001 Mupr-Chr10962 1680 2631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10962g00001 2 119 MYB Transcription Factor Family AT5G52600 55.932 1.41e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10962g00001 Myb_DNA-binding 6.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10962g00001 K09422 - gmx:778159 161.384