Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10934g00002 ATGGCCTCAGATTCAAAAGCAGCCACCATTGTGATCAAGGATCTCAGATTTACATACCCCGGCATCGACGGCCATCCCCCGCCGGGTTCCGCTCCCCTCATTCAGGATTTCTCTCTCACTCTCTGTTCCGGCGACCGCTGCCTTCTCGTCGGTTCCAACGGCGCCGGGAAGACCACCATCCTGAAGATATTGGGAGGGAAGCACATGGTGGAGCCGGACATGGTTCGCGTGCTCGGAAGATCAGCTTTTCACGACACCACTTTAGTGTCTTCTGGCGATCTCTGTTATCTTGGTGGAGAGTGGAGGCGGGATGTTGCTTTTGCAGGTTTTGAGATTCCCATTCAAATGGACGTTTCTGCTCAAAAAATGATATTTGGTGTGCCTGGGATTGATCCTCTAAGAAGAGCGGAGCTAATCAAGGTATTAGATGTCGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATATGTATGGGTCTCCTGAAACCATTCAAGGTTCTTCTTCTCGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGACATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACTATTATCTATGCAACTCATATATTTGATGGTCTTGAGAATTGGCCTACAAATATTGTTTATGTAGCCCATGGAAAGCTGCAACTAGCAATGCCTATGGACAAAGTAAAAGAAATTAGCAAATTGTCACTAATGAGAACAGTAGAAAGTTGGCTGCGAAAAGAACGAGATGAAGATAGAAAGAAAAGGAAAGAGAGAAAAGCAGCTGGTCTTCCTGAATTTGGGAAGCAAGTTGAGGGAAGCCGTGTAACAGGGGATCCAGCGCGTGCTGCAGTTCGAGTAATTAACAATGGCTGGGCAGCAGGACGATTAAATTCCACCGTTGCTGGTGAGGAAAACTTTCTCCTGAGCTCAAACCGAACGATTGGTATTTCAATGGTTGGTCGGACAGTCCACATCCCAACAAGTATCAAGCAAAGTGTAGGTCTTCAACCAGTTGTGTCCTCCTATCCTCATGACCTTAACGTGGGTTCAGAT 1089 0.4628 MASDSKAATIVIKDLRFTYPGIDGHPPPGSAPLIQDFSLTLCSGDRCLLVGSNGAGKTTILKILGGKHMVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEIPIQMDVSAQKMIFGVPGIDPLRRAELIKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLTFLRKECEERGATIIYATHIFDGLENWPTNIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKQVEGSRVTGDPARAAVRVINNGWAAGRLNSTVAGEENFLLSSNRTIGISMVGRTVHIPTSIKQSVGLQPVVSSYPHDLNVGSD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10934g00002 363 Pfam ABC transporter 35 180 IPR003439 GO:0005524
Mupr10934g00002 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 245 IPR027417 -
Mupr10934g00002 363 SMART AAA_5 43 230 IPR003593 GO:0016887
Mupr10934g00002 363 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 253 IPR003439 GO:0005524
Mupr10934g00002 363 MobiDBLite consensus disorder prediction 259 276 - -
Mupr10934g00002 363 MobiDBLite consensus disorder prediction 259 286 - -
Mupr10934g00002 363 Gene3D - 5 282 IPR027417 -
Mupr10934g00002 363 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 8 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10934g00002 Mupr-Chr10934 4848 9500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10934g00002 12 207 Calmodulin-binding Proteins AT2G36910 23.005 6.98e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10934g00002 K12608 - gmx:100782386 596.66