Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10928g00007 ATGGCACCTAAGAACGATGAAACAAGCAAGAGAGCAATGAACAGAGGAGCGTGGACCCCAGAGGAAGACCGGAAGCTGGCCCAATGCATTGAAACTCATGGTGCAAAGAGGTGGAAGGCTGTTGCAGTTAAATCAGGTTTGAATAGATGTGGGAAGAGTTGCAGGTTGAGATGGTTAAACTATCTCAGACCCAATATCAAGAGGGGAAACATATCTGTTGAAGAAGAGGATTTGATTCTTAGGCTTCACAAACTTCTCGGAAACAGGTACCTTTGTCATTGTACAATTCTAGTTCCAAGTAAAATGCGCTACCAGTTATCGTCTTTGTGGTCTTTGATAGCTGGGAGGCTCCCAGGACGCACTGACAATGAAATTAAAAATTATTGGAATTCTCATTTGTGCAAAAAAGTTAATCAGAAGGAGGAGAAGGCAGAAGCTTCAACAACACAAGAAATTATTGGGCAGAATCAGAATGCTGGGGACAACAATGCAGAGTTAGAGAATGAGATCGCAACAAATGAAAGTGGTAACTCAGATGTTTACTTCGACGTCAACGAATTCTTCAACTTCTCCTCGGATGAACCCTATGGGTTTGATTGGCTCAACAAGTACTTGGAACTGGACGACATTCCTCAGGGTACAAAAAATATCTGA 654 0.4235 MAPKNDETSKRAMNRGAWTPEEDRKLAQCIETHGAKRWKAVAVKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEEDLILRLHKLLGNRYLCHCTILVPSKMRYQLSSLWSLIAGRLPGRTDNEIKNYWNSHLCKKVNQKEEKAEASTTQEIIGQNQNAGDNNAELENEIATNESGNSDVYFDVNEFFNFSSDEPYGFDWLNKYLELDDIPQGTKNI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10928g00007 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 137 IPR017930 -
Mupr10928g00007 217 Coils Coil 149 169 - -
Mupr10928g00007 217 ProSiteProfiles Myb-like domain profile. 63 133 IPR001005 -
Mupr10928g00007 217 Gene3D - 71 163 - -
Mupr10928g00007 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Mupr10928g00007 217 SMART sant 14 64 IPR001005 -
Mupr10928g00007 217 SMART sant 67 135 IPR001005 -
Mupr10928g00007 217 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 7 158 - -
Mupr10928g00007 217 CDD SANT 72 133 IPR001005 -
Mupr10928g00007 217 FunFam MYB-related transcription factor 14 67 - -
Mupr10928g00007 217 Gene3D - 15 67 - -
Mupr10928g00007 217 SUPERFAMILY Homeodomain-like 13 129 IPR009057 -
Mupr10928g00007 217 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mupr10928g00007 217 Pfam Myb-like DNA-binding domain 68 133 IPR001005 -
Mupr10928g00007 217 CDD SANT 17 62 IPR001005 -
Mupr10928g00007 217 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10928g00007 Mupr-Chr10928 39664 42804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10928g00007 7 147 MYB Transcription Factor Family AT5G52600 54.610 1.25e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10928g00007 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10928g00007 K09422 - gmx:100799575 320.087