Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10925g00002 GGAAGACAAATCAGAGACATTATTCCCTTTTTGCATAAGGTTATGATGGGGACTGAGCTTATGAGAATATGTGTTAAAGAAGATAATGATGATTTTCCATCAGTTCCACCGGGTTTTGAGTCATATACATCTTTCTCACTGAAGAGGGTAGAAAACAATGAAAAAGAAAATGATAAAAATATGACCAGCTGTTCAGCCTCTACAAGTGCTTCTGAATCACCATCAACTCAGGTGGAAAATGATGTTCAAGTTCGTGATACTGCAAAGGTTCCTAGATCCCTTCGACGAAGACCATGGATTAATTATGAACAATACGAGAACAGTTCAGATGAAGACTCTGACTGTGAGCGGCTTGGTCAATGTCTTACATATGAATGTCAATGCAGAATTTCTCCTCAAGATCTTGTCTTCCTCGAGGAGTTATCCGTGGATGTCCAGATTGCAGTTGTTGCCAGATGGCGACCAGAAGATGCTCATAGGCCAAATCTTGAGGATGCTCCTGTTTTCTACCCTACTGAAGAGGAGTTTGAAGATACTTTGAAATATATATCAAGCATTCGCTCCAGGGCCGAGCCATATGGAATTTGTCGCATTGTTCCACCGTCTTCTTGGAAACCCCCTTGTCCTCTCAAGGAAAGAAGTATATGGGAGGGTACTAAATTTTCTACACGGGTTCAGAGGATTGACAAACTTCAGAATCGTGATTCAATGAGAAAGATGTCAAGGATTCAAAGTAATATGAAGAGGAAAAGGAGAAGAGGCTCAAGAATGGGGGTGGACAATAGCAGAGGGCCTAACGCCGGATTTTGTGAAGTTGAAACGTTTGGGTTTGAACCTGGTCCAGAATTTACCTTGGAAACATTTCAGAGATATGCGGAAGATTTTCAGCTCAAATACTTCAGAAAAAATGAGAATGTATCTCATTTGGGTGCTAATACAACAATTTTAAATGGTACCTCGGAGCCTTCTGTGGAGAACATTGAAGGTGAATATTGGCGGATGGTCGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACTGGGATTTTTGGGAGTGGTTTCCCTAGCAAATCTAGTCATGTAGGTTCTGCTTCACATGAACAATACATAAAATCTGGATGGAATTTAAATAACTTTGCAAGGCTACCTGGATCCCTGCTCTCTTATGAAAGCAGTGATATATCTGGTGTTCTAGTGCCCTGGTTGTACATAGGAATGTGCTTTTCCTCCTTTTGTTGGCATGTGGAAGATCACCATTTATATTCATTGAATTACATGCATTGGGGAGCTCCAAAAATGTGGTATGGTGTCCCTGGAAAAGATGCCTGCAAATTGGAAGAGGCCATGAGAAAACATTTACCAGAACTTTTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTGCTATCCTGAAGTCTAAAGGAGTACCAGTTTATAGGTGTCTCCAAAACCCTGGGGACTTTGTTCTGACATTTCCTCGAGCCTACCACTCTGGGTTCAATTGTGGCTTCAACTGTGCTGAGGCTGTTAATGTAGCTCCTGTTGACTGGCTTCCCCATGGGCATATTGCTATAGAGCTGTACCAGGAGCAGGGGCGCAAGACTTCTATATCACATGATAAGCTGTTGCTTGGGGCTGCAAGGGAAGCAGTACGAGCTCAATGGGAGCTTAATTTGCTGAAGAATAATACTTTGGATAATCTACGATGGAAGGATGTCTGTGGAAAGGATGGTCTTTTGGCAAAAGCACTCAAG 1785 0.4224 GRQIRDIIPFLHKVMMGTELMRICVKEDNDDFPSVPPGFESYTSFSLKRVENNEKENDKNMTSCSASTSASESPSTQVENDVQVRDTAKVPRSLRRRPWINYEQYENSSDEDSDCERLGQCLTYECQCRISPQDLVFLEELSVDVQIAVVARWRPEDAHRPNLEDAPVFYPTEEEFEDTLKYISSIRSRAEPYGICRIVPPSSWKPPCPLKERSIWEGTKFSTRVQRIDKLQNRDSMRKMSRIQSNMKRKRRRGSRMGVDNSRGPNAGFCEVETFGFEPGPEFTLETFQRYAEDFQLKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSKSSHVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPAILKSKGVPVYRCLQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKLLLGAAREAVRAQWELNLLKNNTLDNLRWKDVCGKDGLLAKALK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10925g00002 595 PANTHER LYSINE-SPECIFIC DEMETHYLASE 160 595 - -
Mupr10925g00002 595 Pfam jmjN domain 167 200 IPR003349 -
Mupr10925g00002 595 ProSiteProfiles JmjC domain profile. 376 539 IPR003347 -
Mupr10925g00002 595 Gene3D Cupin 151 523 - -
Mupr10925g00002 595 SMART JmjN_1 165 206 IPR003349 -
Mupr10925g00002 595 MobiDBLite consensus disorder prediction 54 87 - -
Mupr10925g00002 595 ProSiteProfiles JmjN domain profile. 166 207 IPR003349 -
Mupr10925g00002 595 SMART cupin_9 376 539 IPR003347 -
Mupr10925g00002 595 MobiDBLite consensus disorder prediction 59 83 - -
Mupr10925g00002 595 MobiDBLite consensus disorder prediction 234 263 - -
Mupr10925g00002 595 SUPERFAMILY Clavaminate synthase-like 374 566 - -
Mupr10925g00002 595 Pfam JmjC domain, hydroxylase 406 522 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10925g00002 Mupr-Chr10925 18731 22289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10925g00002 16 595 JUMONJI Transcription Factor Family AT1G08620 64.983 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr10925g00002 JmjC 7.4e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10925g00002 K11446 - gmx:100800271 1053.12