Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10910g00001 ATGCATGTCCACCAAAAGAAAGCTTTTCAATTTCTTTGGCAAAATATTGGAGGGTCTATGAAACCAACACTTAGGGAAGCAGAATCCAAAAGAAGAGGGGGTTGTGTGATATCTCGTGCTCCCAGAGCTGGAAAAACTTTTCTCATCATTGCATTTCTCATTAGCTATTTAAAGCTATTCCCAGGGAAGAAGCCTCTTGTCCTAACTCCAAAAATCACACTCCACACTTGGTACAAAGAATTCATCAAATGGGAGATTTCTATGCCAATGTATCTGATTCATGGGCGTGAGTTTGCAGACAGAAAGTACATGGCTAAAGCATTGAGGGAAGGCTCTGGGATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAAGACCCAAATTACAGAAGGAAAAGCAAAACGGCAGAGAAGGCACGCCATTTACTAGAATCAAGAGCTAGAAAAATGTTCTTAGATAACATTGCTAAGAAAATTGACTCGGGTATTGGAAAAGAGAGGATGAGGGGTCTAAACATGTTGAGAGAAATCACAAATGGCTTTATAGATGTTTATGAGAGTGCAAATTTTGAGAATGTTCCTGGTTTGCAAATCTATACGTTACTAATGCACACAACTCACATGCAGCGTGAAATTTTGCTGAAACTGCATACTAGGATGGTTGAGTGCAGCGGTTACCCTCTTGAGTTAGAGCTTTTCATAACCCTTGGATCAATACATCCATGGTTGGTCAAACAGCCACATCTTGATGTGAAAATAGGGTCAAAAGTTAAATTTGTTTTGAGCCTTGTTTTTCGTGTTATGGAGAGGGAGAAAGTGCTTATCTTCTGCCACAACCATCCACCTGTGAGGTTATTAGTAGAGTTATTTGAGCTGCTCTTCAAGTGGGAAAAAGATAGAGAAGTTTTGTTGCTTAATCTAGATCTCTTTGAACATGGGAAAGTGATAGATAAGTTTGAGAACCCTGGAGGAGCATCAAAGGTACTACTTGCTTCAATTACAACTTGTGCTGAAGGTATTAGTTTAACAGCAGCTTCTAGAGTGGTTTTTTTGGACTCAGAGTGGAATCCATCAAAGACAAAGCAGGCTATAGCAAGGGCTTTTCGTCCTGGTCAGAAAAAAATGGTTTATGTGTATCAGCTATTGGCAACAGGCACATTAGAGGAAGATAAGTACCAAAGAACCACTTGGAAAGAGTGGGTTTCTAGCATGATATTTAGTGAGGCTTTTGAGGAGAACCCTTCACATTGA 1272 0.3994 MHVHQKKAFQFLWQNIGGSMKPTLREAESKRRGGCVISRAPRAGKTFLIIAFLISYLKLFPGKKPLVLTPKITLHTWYKEFIKWEISMPMYLIHGREFADRKYMAKALREGSGILILDEGHNPRSTKSRLRKDPNYRRKSKTAEKARHLLESRARKMFLDNIAKKIDSGIGKERMRGLNMLREITNGFIDVYESANFENVPGLQIYTLLMHTTHMQREILLKLHTRMVECSGYPLELELFITLGSIHPWLVKQPHLDVKIGSKVKFVLSLVFRVMEREKVLIFCHNHPPVRLLVELFELLFKWEKDREVLLLNLDLFEHGKVIDKFENPGGASKVLLASITTCAEGISLTAASRVVFLDSEWNPSKTKQAIARAFRPGQKKMVYVYQLLATGTLEEDKYQRTTWKEWVSSMIFSEAFEENPSH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10910g00001 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 132 IPR027417 -
Mupr10910g00001 423 Pfam Helicase conserved C-terminal domain 263 377 IPR001650 -
Mupr10910g00001 423 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 142 422 IPR044567 GO:0080188
Mupr10910g00001 423 SMART helicmild6 291 378 IPR001650 -
Mupr10910g00001 423 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 266 423 IPR001650 -
Mupr10910g00001 423 MobiDBLite consensus disorder prediction 119 143 - -
Mupr10910g00001 423 Gene3D - 1 113 IPR038718 -
Mupr10910g00001 423 Gene3D - 242 422 IPR027417 -
Mupr10910g00001 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 414 IPR027417 -
Mupr10910g00001 423 CDD SF2_C_SNF 254 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10910g00001 Mupr-Chr10910 818 2368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10910g00001 321 396 RAD5 or RAD16-like Gene Family AT5G05130 44.156 1.46e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10910g00001 K10875 - gmx:100811703 567.385