Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10906g00001 TCAAATCAAACCAAACCCATTTTTATTGTTTTCTTTATTCCCTCCCTTCCTTCCTCATCACTTGCAGCTTCTCTACTCTATCTAGCTAGGGAAATGTCTAGCAGAAGGTCAAGACAGCAATCTTCATCCACAAGGATCTCCGATGACCAAATCATCGAACTCATTTCCAAGTTGCGTCAACTTGTTCCTGAGATTCGAGATAGGCGCTCTGACAAGGTATCAGCATCGAAGGTCCTACAAGAGACCTGTAACTACATCAGAAGCTTACACAGAGAAGTGGATGACTTAAGCGAACGACTGTCTCAGTTGTTGGCCACAATTGATGCTGATAGTCCTGAAGCTGCTATCATTAGGAGCCTAATTAACTAA 369 0.4282 SNQTKPIFIVFFIPSLPSSSLAASLLYLAREMSSRRSRQQSSSTRISDDQIIELISKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSPEAAIIRSLIN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10906g00001 122 Gene3D - 28 114 IPR036638 GO:0046983
Mupr10906g00001 122 Coils Coil 86 106 - -
Mupr10906g00001 122 Pfam Helix-loop-helix DNA-binding domain 50 90 IPR011598 GO:0046983
Mupr10906g00001 122 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 109 IPR036638 GO:0046983
Mupr10906g00001 122 FunFam Transcription factor ILI6 36 118 - -
Mupr10906g00001 122 CDD bHLH_AtPRE_like 45 106 - -
Mupr10906g00001 122 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 89 IPR011598 GO:0046983
Mupr10906g00001 122 PANTHER TRANSCRIPTION FACTOR PRE 32 121 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10906g00001 Mupr-Chr10906 13329 15719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10906g00001 45 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 75.641 2.26e-36 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10906g00001 HLH 7.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10906g00001 - - gmx:100794486 150.984