Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10887g00001 ATGGAGACGCAGCGAATTATAGAGTTTCCGCATCGGAACATGGACAAGAGGCCGAGGAAGAAGCCTCGTTTAACATGGGAAATGCCTCCTCCTCCTCCACCTCTTCCTCCTCCCAAGGTTCCTCCTACTATGTATTGCACCCAGGAGGTTGGGAATGGAGCGGTTCCAAATCATGTTTATCCACCCATATTTTATAGGGGTATGTCTCGCAATGGATCGCCCCCCTGGAGGCCTGATGATAAAGATGGTCACTACGTTTTTGCTGTTGGTGAAAATTTAACACCTCGATACAAAATTCTCAGTAAAATGGGTGAAGGAACTTTTGGCCAGGTGTTGGAATGTTTTGACAATGAAAAGAAAGAAATTGTGGCTATTAAAATCATTCGCTCCATAAATAAGTATCGTGAGGCTGCAATGACTGAAATTGATATCTTGCTGAGGCTAGCCAGACATGATGTTGATGATGCTAAAAGAGATTGTGGTATAAGTGGTTTCGTTCTTTGCAGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCTATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATGTATATTATTAGTCAATTATACCTTCAAGTCACTTATTGTGTCTCTCATATTTGTAGTTATGCATGATTTATGCTTGATTCACACGGATTTGAAGCCAGAGAATATTCTGCTTGTCTCATCAGAATTCATTAAAGTGCCAGACTATAAGTTTCTATCACGGACCACAAAAGATGGCTCTTATTTCAAGAATCTACCCAAGTCAAGTGCCATTAAGCTCATTGATTTTGGGAGTACAACATTTGAACATCAGGATCACAATTATGTTGTGTCAACAAGACACTATCGTGCGCCAGAAGTTATCTTAGGTCTTGGGTGGAACTATCCTTGTGATCTTTGGAGTGTGGGCTGCATACTGGTCGAGCTTTGCTCTGGAGAGGCACTTTTCCAAACACATGAGAACTTGGAACATCTTGCCATGATGGAGAGAGTTCTAGGTCCAATACCTCCCCATATGGTGGCCAGGGCTGATCGTCGAGCAGAAAAGTATTTTAAAAGAGGTGCACGATTAAGTTGGCCTGATAGTTCAACTTCAAGAGAAAGTATGAGGGCAGTTTGGAAATTGCTGCGTTTGCCGAACCTTATAATGCAGCATGTTGACCATTCTGCTGGCGATTTGATTGACCTCTTGCAAGGGCTCCTAAGGTATGACCCTTCAGAACGGCTTAAAGCTAAGGAAGCATTGAGACACCCCTTCTTCTTTACAAGAGATACTAAAAGATATGGCTACCCTTTATAA 1407 0.4186 METQRIIEFPHRNMDKRPRKKPRLTWEMPPPPPPLPPPKVPPTMYCTQEVGNGAVPNHVYPPIFYRGMSRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLECFDNEKKEIVAIKIIRSINKYREAAMTEIDILLRLARHDVDDAKRDCGISGFVLCSCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVACILLVNYTFKSLIVSLIFVVMHDLCLIHTDLKPENILLVSSEFIKVPDYKFLSRTTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPIPPHMVARADRRAEKYFKRGARLSWPDSSTSRESMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLKAKEALRHPFFFTRDTKRYGYPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10887g00001 468 SMART serkin_6 97 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10887g00001 468 CDD PKc_CLK 84 456 - -
Mupr10887g00001 468 Gene3D Phosphorylase Kinase; domain 1 73 187 - -
Mupr10887g00001 468 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 458 - -
Mupr10887g00001 468 ProSiteProfiles Protein kinase domain profile. 97 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10887g00001 468 MobiDBLite consensus disorder prediction 25 39 - -
Mupr10887g00001 468 MobiDBLite consensus disorder prediction 1 39 - -
Mupr10887g00001 468 MobiDBLite consensus disorder prediction 1 24 - -
Mupr10887g00001 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mupr10887g00001 468 Pfam Protein kinase domain 97 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10887g00001 468 Gene3D Transferase(Phosphotransferase) domain 1 188 464 - -
Mupr10887g00001 468 SUPERFAMILY Protein kinase-like (PK-like) 84 459 IPR011009 -
Mupr10887g00001 468 FunFam Serine/threonine-protein kinase AFC2 185 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10887g00001 Mupr-Chr10887 7521 11632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10887g00001 97 456 Core Cell Cycle Gene Families AT1G76540 25.201 2.52e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mupr10887g00001 Pkinase 7.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10887g00001 K08287 - gmx:100808061 816.609