Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10881g00001 ATGAGTAAGATCAGCAACTTGAGCTCTGTAAGCAGTTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGGAAGCCGGACTGGCTAGGCCTGCCCGCAGGAGTGAAGTTTGATCCCACAGACCAAGAACTAATAGAGCATCTTGAAGCCAAAGTGGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGGATTTGTTATACCCATCCGGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAGGCACTTTTTCCATAGACCTTCAAAGGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAGTGTGACTTGCAAGGTGGGGAAACCCGGTGGCACAAGACTGGTAAGACGAGACCAGTGATGGTGAATGGAAAACAAAAGGGTTGCAAGAAAATTCTGGTCCTCTACACCAACTTTGGGAAGAACAGAAAGCCCGAGAAAACCAACTGGGTGATGCACCAATACCACTTGGGGCAACACGAGGAAGAGAAAGAAGGAGAACTTGTGGTGTCAAAGATATTCTACCAGACACAGCCAAGGCAGTGTAACTGGTCAGATAGAAGTGCAACAACTGGTGAAGGAAGTGGAGAACCTAACAACAGTAGTAGAAGGGACAGTGGAAGTGGAAGTTGTTCTTCCAAGGAAATTGTTACTCACAGAGATGAGATGTCTGCTGTTGTTGGTGTCCCTCCAATCACAAGTTTCACTCATCATCATCCCTTGGATATTCAACACCTAAAAAACGATCATTTTAGCTTCATCCCTTTCAGGAAAAGCTTCGATGAGGTTGGAATAGGAGAGGGTTCCACAGCAAGAGAAATGCAAGCATCAGGTTCATGTGAAGAGGTGCATGAACGGCAGAGAACACAACATGTAGCTCATCATCATCAACAACAGCATGCTCATCATCAGATTTCAAACTCAGCTTTTCATATCAGTAGGCCGTCACATCCCATCTCTACCATTATCTCTCCGCCTCCCCTCCACCACACATCCATCATTCTCGACGACAACTCCTACCATGTCTCTAGAATAATGCTCCAAAATGAAAATTTCCAGCAACAACATCATAAGCTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCATCCATCACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGACCCTGACAACCCGGATCATCATGGATAG 1329 0.4552 MSKISNLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNSSRRDSGSGSCSSKEIVTHRDEMSAVVGVPPITSFTHHHPLDIQHLKNDHFSFIPFRKSFDEVGIGEGSTAREMQASGSCEEVHERQRTQHVAHHHQQQHAHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNSYHVSRIMLQNENFQQQHHKLGGRSASGLEELIMGCTSTEIKEESSITNPQEAEWLKYSSYWPDPDNPDHHG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10881g00001 442 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Mupr10881g00001 442 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Mupr10881g00001 442 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Mupr10881g00001 442 MobiDBLite consensus disorder prediction 215 246 - -
Mupr10881g00001 442 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 330 IPR044799 GO:0003700
Mupr10881g00001 442 FunFam NAC domain-containing protein 73 56 212 - -
Mupr10881g00001 442 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Mupr10881g00001 442 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10881g00001 Mupr-Chr10881 6701 10963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10881g00001 11 439 NAC Transcription Factor Family AT5G56620 54.825 6.57e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr10881g00001 NAM 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10881g00001 - - gmx:100795246 812.757