Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10879g00001 ATGGAGTTTGATCCAAGCTTCCCAGAGAAAATTCCCTACCTTTCTGGGATTTTCCATGAACACCCGTGCATCAAATCAGAGATCCCCATGCCAGAAGAGAACACCACCTTCATGTACCAAAACAATTTCAACCATTTTCAGTACCATCCCCTGGATGAGCCAAACCATGACCACTGTGCAAATTTTGTCACAGAGGGTTCTTCCTCCGTCATCACCCCATTATTCTCTTTGTCCTCATCAACCCCTTCTGCAGGTGACTCATCTTCCTACAAACCCAATGAGTTCCTCAAAGGAGGCTTTGCCAACTCCTACTATTGCATGCCTTTTGCTCCAAACCGTGCCAAAGCTGAACCCATGCATGCCCACCCCAACACCGACAAGGGTATCTGGGATTTTTCACAGAAAACTCCATTTCACTCTGGTGCAAGTGCAACTTCACAGTTTCAGGTGCAGAGGAAGAGTACTGGCAAAATTCAGCACAAGTTTACCAACATAATCAAAGGCCAGTGGAGTGCTGAAGAGGACAGGGTCCTCGTCCAACTGGTGAAACGCTTCGGGCTCAAAAAATGGTCTCAGATCGCCAGGTTGCTGAATGGCAGGGTTGGGAAACAGTGCAGAGAGAGATGGCACAATCATCTCCGGCCAAACATTAGGGTTTCTTCCTCTTCCATCCTTAAGGACTCATGGAACGAAGAGGAGGACAAAATACTGATTGAAGCTCACAAAGAAATAGGGAACAAGTGGGCAGAAATCGCAAGGAGAATGCCTGACAGGACTGAGAACACCATCAAGAACCACTGGAACGCGACGAAGAGGCGCCTGAACGCCAAGAGGCAGAGGAACAAGCGCAGCACTTCGAAGGGAGCAACTACGCTCCTTCAGAGCTACATCAGGCAAGTGACCGCGGAAGAAGAGGATGAAAAGGAGCTGAAGAAATCCATGAGCAAGATGAACATAAAGGGTGAGAGTAGTTGCACCACCAACCTCGGTCTCTATCGGGTTCGGTACGAGAGCTCAGAGGGCGACTTCAGCTCCTCCGAAGATTGGGGCACTCAGACTGAGGAGGACGAAGTTGGGTGGAGGAGTGCGCAGCACCGTGTGCCACATGGTGGCGGCTATGTGCCAGTGATGGTCAACGCTGAGGAAGATAGCTCGACGGATTATGAGGTTGCAATGGAGATGACCCCGGAGGTTCAGATGAAGAAGGAAATGGATCTCATGGACATGATTTATAGAAAAGCTTAA 1245 0.494 MEFDPSFPEKIPYLSGIFHEHPCIKSEIPMPEENTTFMYQNNFNHFQYHPLDEPNHDHCANFVTEGSSSVITPLFSLSSSTPSAGDSSSYKPNEFLKGGFANSYYCMPFAPNRAKAEPMHAHPNTDKGIWDFSQKTPFHSGASATSQFQVQRKSTGKIQHKFTNIIKGQWSAEEDRVLVQLVKRFGLKKWSQIARLLNGRVGKQCRERWHNHLRPNIRVSSSSILKDSWNEEEDKILIEAHKEIGNKWAEIARRMPDRTENTIKNHWNATKRRLNAKRQRNKRSTSKGATTLLQSYIRQVTAEEEDEKELKKSMSKMNIKGESSCTTNLGLYRVRYESSEGDFSSSEDWGTQTEEDEVGWRSAQHRVPHGGGYVPVMVNAEEDSSTDYEVAMEMTPEVQMKKEMDLMDMIYRKA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10879g00001 414 PANTHER MYB PROTEIN-RELATED 142 298 - -
Mupr10879g00001 414 CDD SANT 170 213 IPR001005 -
Mupr10879g00001 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 217 IPR017930 -
Mupr10879g00001 414 SMART sant 166 215 IPR001005 -
Mupr10879g00001 414 SMART sant 225 273 IPR001005 -
Mupr10879g00001 414 SUPERFAMILY Homeodomain-like 164 267 IPR009057 -
Mupr10879g00001 414 Gene3D - 166 218 - -
Mupr10879g00001 414 ProSiteProfiles Myb-like domain profile. 162 213 IPR001005 -
Mupr10879g00001 414 FunFam Transcriptional activator Myb isoform A 166 218 - -
Mupr10879g00001 414 CDD SANT 228 271 IPR001005 -
Mupr10879g00001 414 Pfam Myb-like DNA-binding domain 226 268 IPR001005 -
Mupr10879g00001 414 Pfam Myb-like DNA-binding domain 167 213 IPR001005 -
Mupr10879g00001 414 ProSiteProfiles Myb-like domain profile. 221 271 IPR001005 -
Mupr10879g00001 414 Coils Coil 293 313 - -
Mupr10879g00001 414 Gene3D - 227 294 - -
Mupr10879g00001 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 275 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10879g00001 Mupr-Chr10879 1783 5154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10879g00001 161 300 MYB Transcription Factor Family AT4G18770 61.429 1.05e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10879g00001 Myb_DNA-binding 8.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10879g00001 K09422 - ccaj:109799074 463.381