Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10863g00001 ATGGACAGCAGAAACATCGTCGTCTGCGACAACGGAACCGGGTATGTGAAGTGTGGTTTTGCTGGGGAGAATTTCCCCACTTCGGTTTTTCCTTGCGTAGTGGGAAGGCCAATGCTCCGTTACGAAGAATCACTCACCGAGCAAGAGCTTAAGGATATTGTTGTTGGCGAAGGGTGTGCAGACTTGCGGCATCAGCTTGATATATCTTATCCTGTCAACAATGGCATCGTGCAAAATTGGGATGATATGTGTCACGTGTGGGATCATGCGTTTTACAATGAATTGAAGATTAACCCTCCAGACTGTAAGATTCTACTCACCGATCCGCCTCTTAATCCTTCCAAGAATCGCGAAAAAATGGTTGAGACAATGTTTGAGAAGTACAATTTTGCTGGAGTGTTTATCCAAATCCAAGCTGTTCTAACACTATATGCTCAAGGTTTGCTGACTGGATTAGTTATTGACTCGGGTGATGGTGTCACTCATGTGGTTCCAGTTGTTGATGGTTATTCTTTTCCTCATCTAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTAGTAGATTTGCTTTCAAGGAGGGGTTATGACTACAAGAGGGAATATCAGTTGGGGCTTGAGACCACTATCCTTGTTAAGAACTATACTTGTGTTTGGTTTAAAGGAAGGAAGGGGAGGGTTCCCTTGTTTGGTTTGGGCCAAGAGAAGTGGAGGGGAGGGAAAATATGGCTTCCAGATGGAAGGGTCATTAAAGTAGGTACTGAAAGGTTCCAGGCTCCTGAGGCTCTTTTCACTCCAGAACTTATAGATGTAGAAGGTGATGGAATGGCTGACATGGTATTTCGCTGCATTCAGGAAATGGATATTGACAACCGGATGATGGTTAACCCAAGAGGTGAAGTGGTGAAGAACAAAGCCAGACTTGTGGCAAAGGGTTTTCTGCAGAAAGCTGGAATAGACTATGGAGAAGTCTATGCACCAATAGCCAGGATTGAAACTATCAGTTTGCTGGATGTGAAATCTGCCTTCCTCAATGGTCCACTTGAAGAAGAGGTTTATGTGGATCAGCCGCTGGGTTTTGTAGTTAAAGGCAAAGAAAACAAGGTGTACAAACTAAAGAAGGCACTTTATGGTCTTAAACAGGCACCAAGAGCCTGGAACAAGAGAATTGATGGCTACCTATCTCAGATTGGCTTTAAAAAATGCACCTTAGAACATGGAGTTTATATGATGAATGAGTTTGAGATGAGTGACCTTGGACTCCTCTCTTACTTCTTGGGGATTGAATTTGAAATGACTCGGTATAGAATGGTTATGCATCAAACCAAGTATGCAACGGATCTATTGAAGAGGCTCAATATGCAGCAAAGTAATCCAATAGGAACACCAGTAGAGGTTGGACTCAGTTTAAAGAAGGAAATAGATGAAGAGCAAGTTGATCCTACTCACTACAAAAGGATAGTTGGGTGCTTGAGGTTCATGCAAGAGTCAAAGCAGTCTCACTTATTAGCTGCAAAGAAAATATTGAGGTATGTGCAGGGGATGGTTGATTTTGGAATCCTATTTTCAAAGGAAGAAGATGCTACAAAACCAGAATTGGATAGAAAAAGCACTGCAGGGAACATTTTCTTCTATGGAGGAGCTCTGATTTCTTGGTCCTCTACAAAGAAACCTGTAGTAGCATTGTCATCCTGTGAGATTGAGTATATTGCAGCTTCTGGAACAGCTTGTCAAGCAGTATGGCTAGATGCTTTGTTGGGAGAATTACAGGAGAAGAATTCGAAGAAGGTAAAGTTGCTGGTAGACAACAAATCTGCCATTGATCTAGCAAGGCATCCAACATCTCATGGGAGGAACAAACATATAGAAACAAGCTCTAGAGGGTCTTGCCCTTTCTATAACCTGCACAGTGCACTCCTGCCTCTTGCTATTCTATATCAACACATTGTTTTAAGTGGAGGGAGCACCATGTATCCTGGATTACCAAGCCGATTGGAAAAAGAAATACTTGATCGTTATCTTGATGTTGTCCTAAAGGGTAACAAAGATGGATTGAAGTTAAGGAAACTTCATCTTAAAAGCTCCTCCTATTTGTCTCTGTTATGGTCCAGTTCTTTAGATCTGATCCCTGTTCTCTTCAAGCCTTCAAAGTCTTCTCTGACGATCGCACAATCTCAACAACCTGATTCTTTTTTTAAATTACGACTGAGAATCGAGGATCCACCACGTAGGAAGCACATGGTGTACCTTGGAGGTGCCGTCCTTGCTGGAATAATGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAGATTATCTAGAAGAAGGACTTGCTTGCTTAAGCAGGGAAGCAAAAGCGCACCAGAGGCTGAGTGATGAAATATTCAAAGCTGTTAAAACTGCCTCCTTAAATAGCTTTCATTAA 2433 0.4221 MDSRNIVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLTEQELKDIVVGEGCADLRHQLDISYPVNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDPPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYDYKREYQLGLETTILVKNYTCVWFKGRKGRVPLFGLGQEKWRGGKIWLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMVNPRGEVVKNKARLVAKGFLQKAGIDYGEVYAPIARIETISLLDVKSAFLNGPLEEEVYVDQPLGFVVKGKENKVYKLKKALYGLKQAPRAWNKRIDGYLSQIGFKKCTLEHGVYMMNEFEMSDLGLLSYFLGIEFEMTRYRMVMHQTKYATDLLKRLNMQQSNPIGTPVEVGLSLKKEIDEEQVDPTHYKRIVGCLRFMQESKQSHLLAAKKILRYVQGMVDFGILFSKEEDATKPELDRKSTAGNIFFYGGALISWSSTKKPVVALSSCEIEYIAASGTACQAVWLDALLGELQEKNSKKVKLLVDNKSAIDLARHPTSHGRNKHIETSSRGSCPFYNLHSALLPLAILYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNKDGLKLRKLHLKSSSYLSLLWSSSLDLIPVLFKPSKSSLTIAQSQQPDSFFKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYLEEGLACLSREAKAHQRLSDEIFKAVKTASLNSFH 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10863g00001 810 SUPERFAMILY Actin-like ATPase domain 647 785 IPR043129 -
Mupr10863g00001 810 SMART actin_3 4 788 IPR004000 -
Mupr10863g00001 810 FunFam Actin, alpha skeletal muscle 1 160 - -
Mupr10863g00001 810 Pfam Actin 2 295 IPR004000 -
Mupr10863g00001 810 SUPERFAMILY Actin-like ATPase domain 3 154 IPR043129 -
Mupr10863g00001 810 Gene3D - 139 296 - -
Mupr10863g00001 810 PANTHER ACTIN 648 779 IPR004000 -
Mupr10863g00001 810 CDD RNase_HI_RT_Ty1 537 627 - -
Mupr10863g00001 810 CDD NBD_sugar-kinase_HSP70_actin 7 190 - -
Mupr10863g00001 810 Gene3D - 648 758 - -
Mupr10863g00001 810 SUPERFAMILY DNA/RNA polymerases 302 625 IPR043502 -
Mupr10863g00001 810 SUPERFAMILY Actin-like ATPase domain 147 296 IPR043129 -
Mupr10863g00001 810 Gene3D Actin; Chain A, domain 4 181 276 - -
Mupr10863g00001 810 Gene3D - 759 779 - -
Mupr10863g00001 810 Gene3D - 7 138 - -
Mupr10863g00001 810 PRINTS Actin signature 241 257 IPR004000 -
Mupr10863g00001 810 PRINTS Actin signature 25 34 IPR004000 -
Mupr10863g00001 810 PRINTS Actin signature 62 84 IPR004000 -
Mupr10863g00001 810 PRINTS Actin signature 116 129 IPR004000 -
Mupr10863g00001 810 PRINTS Actin signature 141 160 IPR004000 -
Mupr10863g00001 810 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 303 413 IPR013103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10863g00001 Mupr-Chr10863 1584 14440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10863g00001 2 295 Cytoskeleton Gene Families AT3G18780 40.063 3.08e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10863g00001 K17260 - gmx:100803980 528.094