Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10856g00001 ATGACTCTTGAAGATTTTTTTACCTTGACTGAGATGAAAGATGGGCTCACAGCACCTTCGCGGGTGCAGGAGCTGGTCTCTGTGATGCAGAAAGAGAAAGATTGTGAGGTTAAAAATACTGCTGATGCGACAAGGCAGTGGGCTGCTGTTGCAAGCAGTATTGCTGCTACGGAGAATAAAGACTGCCTTGATCTTTTTATTCAGTTAGATGGAGTTTGCTTTATTAATAGATGGTTAAAGGATGCCCAAAATTTTGGCGTTGATGCGAACGACAGCTTTGTTGAAGAATCAATCACTGCAATGTTACGTGCAGTTGAAAAGCTGCATCTAGACAGTGAGAAGTCAATGTCATCAGGAATTCACATCACTGTAAGTAATCTTCTTGGCCATCAAAGTGCTAGGGTTCAGGATAGAGCAAGAACATTATTTGACAGCTGGAAGGGATGTGGAAATGGTGATACTGAATCTCATGATATGGAGCTTGCCAAGGTTGACAATGCAAGTGATGAGATTGTCAAGGAGGAAGGCCAGCCATCTGCTGCAAATGAAGCTGGCAACGATAATGGTCATGCATCAGGATTAATTGGAAATGAGAAATCTCTATTGAGAAGCTCAGATAGTTTACCGATACATAGTTCTGACAATGTGCTCCAGTCATCCACCAGTATGGAATGTGATGACATCAAAGAGGGATCAGCAAACCATGTTGCTGGTGTTCCATCTTCTGCTCAAGAAGTTGCTCCCAGACAGGAAGGATTGCCTTTATGCACTACAGGTGAGACCATTTTGGTTGGAACCTGTAACTTTCCCATTCCAAATCAAGGCAGTTTTGAAGGACAGTCAGATGCGGTACAGTTAAGTGACTTAGCTAAAATGGAAATGCAGGAGCAAAATGTTAATGACCCTCCAGAAAGATTAGGAGCACCAGAGATCTGTTCTGTGTCCTCTATGCCCAGGCCTGAGCCTGTTTCCATGGTTGCTTGTGAAGCAAAAGTACCAGAATCTGTGAAAGAACCAGCTTCAGAGCAAAATGTTGAACACAATGAGGATGATGTTTGTCAAAAGTTAACTACTTCTGCTAGTATGAGGACACCTGCATCTGATAGGAGGAATGGGGAAGATGATGTTAGAACTGTAACTAGCATTACACAAGTTTTGAAAGCTGCAGAAAATGATAATGTCTGTTGTTCTAATGCATTGCAGGACACATCAGTCAGTGACAGTAACTTGGGAAAGACTGAGGTGTTAGACATGTCTGTCTCTGGAACAGAATATGTCACAGCATCAAAGGAAGGCAAGGACCATGTTTATAATGATGACGAAGATATATCAAATGGTTCTGATTCTAGTAAACCTGGAATAGATTTCAGAAGCCCTAACATAATTGACAAGAGAGGCTCTGACAATGAACTTGACTGTGGCATTGGGGATGCTTTAGAATTTGCTCGACAAGTTGCTCAAGAAGTTAACAGAGAAGTCTGCAGTTCTTCGGAAAAAATCTCAGAAGGCAGAATCAGGCAACCCGACAGTCCAGATTCTGTAAGTAAAGATGATGAGCTCACTCCTGTCCCACCCAAGGAGGTTTCTTCCTCCAGACAAAACCATGCGACCGAGGCATGTTCCATGGAGGGGCATGCAAATATTTTAGACAACACCAAGGTTGAACAAGAATGCAGACCTGATGTGGTGTCCTTGGAGATGACAGAAGCAGCTCAAGAATCAGGAGGTAATTCAGAGAAACGACTCTGTGGCTTTGATCTCAATGAAGTTGGTTCTGATGATATGGATGTTTCTGTAAGTACTATGTCTACCCCAATACCTGTTGTCTCTGCTTCAAGGCCCGTGCCAACTCCTGGGTTGCCTGGGGCCCCTTTGCAGTTTGAGGGAACACTTGGATGGAAAGGATCAGCTGCCACCAGTGCCTTTCGACCTGCATCACCTCGTAAAAATTGTGATATTGAGAGGAATCTTTCTGTTGATATGAACTTTGACACTTCCAAGCAGAGGCAGGATTGGCTTGATATTGATCTAAATGTGGCTGAGGATGAAGAAGGCACTGTAAAGCCTATTGCTGAGTCTTCAGGCAGGCAATCATCAGCTGAACTTAGTCCTAAAAGATCAAGCAGGCTTGAATTTGATTTGAACAGTCTCGGTGATGATGGTGACACCCAACCTTCAGATCACAGGATGGAGGGACAACTCTTTCTTGGAAGAAATGGCTATTGGAGCCCGTCACCTGCGTCGTCTTCGTCATCAATGCAGCCATCTGTTAGAAACATTGATTTGAATGACAGGCCATGCCTTCAAACCGATTTGGTAGAACAGGGGCCCAGTAAGTCTTCTCATATTACAAATGCATATGGTTGTTTGAAATCATCAGATGCTCCTGTTATCTCTCTTTTGGGCGCCAAGGTAGAAGTTGGTAAAAAAGAATGTCTTCCTCAAACTCTGTCGTTGCCGAATGGCAAGGCTATTGAACCTGCAATAGATCTTACAATGTCAAGAGCAGGTGGCCTTTTAGGCATAGCCCCCACAGTACCCTTCAATCATTCATCATCTGTTTTTGGGTATAATGGAGTGGCATCAGCATCGGCACCGGCAATGTCTTTTTCATCAGCCATGTACGGGTCAGGTGGCACAATTCCATACATGGTGGACTCGAGAGGAGCTCCAGTTGTCCCTCAAGTCGGTGGGTCTTCATCAACTGTCCTTTCATCTTACTCTCAGCCACCAATCTTTATGAACATGACTGGTACCCAACTTGGTCTGAACGGTTTTGGACCTTCACGTCCTAACTTTGACCTGAACTCTGGCTTCATGATTGATGGTGGTAATAGAGACACATTGGCAGCGAGACAATTTTTCTTTCCTGGTCAGGGCAGGACTGTGGAGGAGCATGTAAGAACCATGTCGCAACCTTCAAGTTCTGGGGTTAGTGGGAAACGAAAGGAACCAGACAGTGGTTGGGAACCCTACCCATTTAACTACAAACATCCGCAACCTCCATGGAAGTAG 3015 0.4431 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQKEKDCEVKNTADATRQWAAVASSIAATENKDCLDLFIQLDGVCFINRWLKDAQNFGVDANDSFVEESITAMLRAVEKLHLDSEKSMSSGIHITVSNLLGHQSARVQDRARTLFDSWKGCGNGDTESHDMELAKVDNASDEIVKEEGQPSAANEAGNDNGHASGLIGNEKSLLRSSDSLPIHSSDNVLQSSTSMECDDIKEGSANHVAGVPSSAQEVAPRQEGLPLCTTGETILVGTCNFPIPNQGSFEGQSDAVQLSDLAKMEMQEQNVNDPPERLGAPEICSVSSMPRPEPVSMVACEAKVPESVKEPASEQNVEHNEDDVCQKLTTSASMRTPASDRRNGEDDVRTVTSITQVLKAAENDNVCCSNALQDTSVSDSNLGKTEVLDMSVSGTEYVTASKEGKDHVYNDDEDISNGSDSSKPGIDFRSPNIIDKRGSDNELDCGIGDALEFARQVAQEVNREVCSSSEKISEGRIRQPDSPDSVSKDDELTPVPPKEVSSSRQNHATEACSMEGHANILDNTKVEQECRPDVVSLEMTEAAQESGGNSEKRLCGFDLNEVGSDDMDVSVSTMSTPIPVVSASRPVPTPGLPGAPLQFEGTLGWKGSAATSAFRPASPRKNCDIERNLSVDMNFDTSKQRQDWLDIDLNVAEDEEGTVKPIAESSGRQSSAELSPKRSSRLEFDLNSLGDDGDTQPSDHRMEGQLFLGRNGYWSPSPASSSSSMQPSVRNIDLNDRPCLQTDLVEQGPSKSSHITNAYGCLKSSDAPVISLLGAKVEVGKKECLPQTLSLPNGKAIEPAIDLTMSRAGGLLGIAPTVPFNHSSSVFGYNGVASASAPAMSFSSAMYGSGGTIPYMVDSRGAPVVPQVGGSSSTVLSSYSQPPIFMNMTGTQLGLNGFGPSRPNFDLNSGFMIDGGNRDTLAARQFFFPGQGRTVEEHVRTMSQPSSSGVSGKRKEPDSGWEPYPFNYKHPQPPWK 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10856g00001 1004 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 1004 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 495 523 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 171 195 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 684 729 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 431 467 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 492 536 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 967 1004 - -
Mupr10856g00001 1004 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 156 IPR035441 -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 706 727 - -
Mupr10856g00001 1004 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 691 705 - -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 431 446 - -
Mupr10856g00001 1004 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 149 IPR035441 -
Mupr10856g00001 1004 MobiDBLite consensus disorder prediction 967 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10856g00001 Mupr-Chr10856 7859 10873 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mupr10856g00001 Med26 9.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10856g00001 - - ccaj:109815659 1676.37