Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10855g00003 ATGGATGTTTGCCGAAATGTATCTGTTTCCACCGAGTGTCAGCAAGAGCTTCCCACCCTCGATGACCTTTTCTCTCATCAGAACACGGAAGTGGATTTTGGCATGGAATGGTTGTCAGTGTTTGTGGAAGACTGTTTCTCTAGTAGGCCAAGTTGCCTCTTGGCACCCCCTGGTGTTGAAACCACAAGCACTAGCACCAAACCATCTTCAAGCACAATGCAAAGACCCCAACAGAATCAGTGTCCTTTGCAGAATTTTGCTGTGCCAGGGAAAGCCAGGAGCAAGAGGAAGAGGCTTTCAGCCCCTAGAACAAAGGACAGTTTAAGCACATGGTCACACAATTTCAGCACTGATGGGTTGAGTTCTGACCCTCCTCTTTTGAAACAAGCTTATTGGTTGGCTGATAGTGAACTCATTGTCCCCAAGAAGGATGGTGAGCAAGAGGGGGTTGTGGTGGTGAGGAAGGAGAAATTGGGGGATTGTGAGGGAGAAGTTGAGAATAGTAGTAATAATAATAATGGGCAGCACCCAATTCCAAGAAGGTGCACACACTGTCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGTAATGCATGTGGGGTGAGGTACAAGTCTGGAAGGTTGCTGCCAGAGTATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTATTTGCATTCCAATTCACACAAGAAAGTCATGGAGATGAGAATGGGTGTTCTATCATCCACTCCTACAGACAAGTAG 768 0.4753 MDVCRNVSVSTECQQELPTLDDLFSHQNTEVDFGMEWLSVFVEDCFSSRPSCLLAPPGVETTSTSTKPSSSTMQRPQQNQCPLQNFAVPGKARSKRKRLSAPRTKDSLSTWSHNFSTDGLSSDPPLLKQAYWLADSELIVPKKDGEQEGVVVVRKEKLGDCEGEVENSSNNNNGQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMGVLSSTPTDK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10855g00003 255 ProSiteProfiles GATA-type zinc finger domain profile. 180 212 IPR000679 GO:0006355|GO:0043565
Mupr10855g00003 255 ProSitePatterns GATA-type zinc finger domain. 182 207 IPR000679 GO:0006355|GO:0043565
Mupr10855g00003 255 MobiDBLite consensus disorder prediction 57 114 - -
Mupr10855g00003 255 Pfam GATA zinc finger 182 216 IPR000679 GO:0006355|GO:0043565
Mupr10855g00003 255 PANTHER GATA TRANSCRIPTION FACTOR 18 249 - -
Mupr10855g00003 255 FunFam GATA transcription factor 170 253 - -
Mupr10855g00003 255 SMART GATA_3 176 230 IPR000679 GO:0006355|GO:0043565
Mupr10855g00003 255 Gene3D - 172 243 IPR013088 GO:0006355|GO:0008270
Mupr10855g00003 255 CDD ZnF_GATA 181 228 IPR000679 GO:0006355|GO:0043565
Mupr10855g00003 255 MobiDBLite consensus disorder prediction 57 85 - -
Mupr10855g00003 255 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 178 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10855g00003 Mupr-Chr10855 21955 23222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10855g00003 35 244 C2C2-Gata Transcription Factor Family AT4G32890 41.667 6.09e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr10855g00003 GATA 1.1e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10855g00003 - - pvu:PHAVU_004G079200g 425.246