Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10846g00001 ATGATGGGTGAGAAGTTGTGTATGAACGAAGAAGACAAGGGTGTGTTGGAAACTGTGTTGGGTGCAGAGGCTGTTGCGTTCTTTATTTCAGCGCTTTCCAACAATGTCTTTTCCGGCGTGGTTGCTCCGTCCGGCGGCACTGACCTGGGTCTCCGCCAGCGGTTGTGCCAGCTTGTTGAGGCTTCCAAGTGGAATTATGCTGTGTTTTGGCAGGTTGCTGGATTGAAGTCTGGTGGTTCTGCCTTGATTTGGGGTGATGGGCATTTCAGTGATTCCAAAGGGGAAAGGAATGGAGTCGGGAAGGAGGATGAGCAGGAGGTTAGAAAGAAGGTGCTGCAGAAGCTTGATGCCTGCTTTGCTGGGTCTGTGTCAAAAGAGGCTAATTATGCAAGGTTGGATAGGGTGTCGGATTTGCTCATGTTTTACTTATCCTCTATGTATTATATATTTGGGTTTGACTCGCCGTGTGGCCCTGGCAGTTCGTTCAAGTCTGGTAAACTAATTTGGGCTTCTGATGCTAGTGGTTGTTTAAACCAATTAGAATCTAGATCGTTTCTAGGGAAATTAGCTGGTCTTCAAACTGTTATTTTTGTTCCTCTGAAATCCGGGGTAATGGAGCTTGGTTCGCTTGAAATGGTAACTGAAGATCAGGGTGTTGTGGAGATGGTCTGTGCGGCATTTGGGGAATCCAGTCCCGGACAGGCAAAGGTGTTTCCAAAGATTTTTGGGCAAGAGTTAAGCCTGGGCGATACAAAATCTCAGTCTATAACTATCAGTTTCTCCCCGAAGGTGGAGGATGATCCTGGTTTCACTTCGGATTCCTATGAAGTTCAAGCTCTAGGGGTGAACCATGCGTATGGAAATTCTTCCAATGGGACTTTAGGTGACAGTAATGAAGCGAAAATGTTCCCTCAATTGAATAAAATGATGGCTGGGAATTTTAACCCTCAAGCAAGGATTCCTTGTCTAGATCTTGGTAATGAAGACTCATCCTCGACTCATGCAGATGAGCGGAAGCCCAGAAAAAGAGGTAGAAAGCCTGCCAATGGGAGAGAGGAACCACTGAACCATGTTGAAGCTGAGAGACAAAGACGCGAGAAGCTTAACCAGAGGTTTTATGCCTTGAGAGCTGTTGTCCCTAATATATCTAAAATGGACAAGGCATCTTTGCTTGGTGATGCCATTACCTTTATTACTGATCTCCAGATGAAGATCAAGGTGTTGGAAGCTGAGAAAAACATGATTAACAATAAGGACCAAAAGTTGTCATTGCCGGATATGGATTTTCAGGACAGAGAGGATGACACAGTTGTGACAGTGAGATGCCCCTTAGATATTCACCCTGTTTCTGATGTTGTTAAAACGTTCAGGGAGCATCAAATCGTGGCACAAGACTCCAGTGTTTCAACTACAGACGATAAAGTAATTCATACATTCTCCATAAGAACTGAGGGAGGGGAGGCTGCTGCCATACAGTTGAAAGAAAAGCTTGAAGCATCCCTTTCCAAAATTGTAATCAATGTTTTAAAATATGTTCAGGTCATCAATGACCAGAATTATTTATCAAGGTTTTTCCGAGAAGTGGCAGTGCCTCAGGGTGTTTGGGATACCCTTGTGGGAATTCAGTTACAGATTCCAGATCCACCAGCAAACAGGGTGCTTTCCCAGTATGTATAA 1677 0.4466 MMGEKLCMNEEDKGVLETVLGAEAVAFFISALSNNVFSGVVAPSGGTDLGLRQRLCQLVEASKWNYAVFWQVAGLKSGGSALIWGDGHFSDSKGERNGVGKEDEQEVRKKVLQKLDACFAGSVSKEANYARLDRVSDLLMFYLSSMYYIFGFDSPCGPGSSFKSGKLIWASDASGCLNQLESRSFLGKLAGLQTVIFVPLKSGVMELGSLEMVTEDQGVVEMVCAAFGESSPGQAKVFPKIFGQELSLGDTKSQSITISFSPKVEDDPGFTSDSYEVQALGVNHAYGNSSNGTLGDSNEAKMFPQLNKMMAGNFNPQARIPCLDLGNEDSSSTHADERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQMKIKVLEAEKNMINNKDQKLSLPDMDFQDREDDTVVTVRCPLDIHPVSDVVKTFREHQIVAQDSSVSTTDDKVIHTFSIRTEGGEAAAIQLKEKLEASLSKIVINVLKYVQVINDQNYLSRFFREVAVPQGVWDTLVGIQLQIPDPPANRVLSQYV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10846g00001 558 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 352 401 IPR011598 GO:0046983
Mupr10846g00001 558 MobiDBLite consensus disorder prediction 330 363 - -
Mupr10846g00001 558 MobiDBLite consensus disorder prediction 321 363 - -
Mupr10846g00001 558 Gene3D - 345 418 IPR036638 GO:0046983
Mupr10846g00001 558 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 227 IPR025610 -
Mupr10846g00001 558 CDD ACT_UUR-ACR-like 436 503 - -
Mupr10846g00001 558 Coils Coil 398 418 - -
Mupr10846g00001 558 CDD bHLH_AtAIB_like 349 427 - -
Mupr10846g00001 558 Pfam Helix-loop-helix DNA-binding domain 356 402 IPR011598 GO:0046983
Mupr10846g00001 558 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 420 IPR036638 GO:0046983
Mupr10846g00001 558 FunFam Transcription factor bHLH13 345 419 - -
Mupr10846g00001 558 PANTHER MYC 45 500 IPR045084 GO:0003700|GO:0006355
Mupr10846g00001 558 ProSiteProfiles ACT domain profile. 437 516 IPR002912 -
Mupr10846g00001 558 SMART finulus 358 407 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10846g00001 Mupr-Chr10846 4607 6629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10846g00001 2 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.638 1.05e-153 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10846g00001 bHLH-MYC_N 3e-42 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10846g00001 - - gmx:100782107 917.916