Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10840g00002 ATGGAGGGAGGAAGATCAGTTTCAAGTGGAAATGCAGAGGTTCGGTATAGAGGGATTCGAAGGAGGCCATGGGGTAAGTTTGCAGCAGAAATTCGCGACCCCACAAGGAAAGGGACTCGGATTTGGCTTGGAACCTTTGACACCGCTGAACAAGCTGCACGAGCTTATGATGCTGCTGCTTTTCATTTTCGCGGCCACAGAGCCATTCTCAACTTCCCTAACGAGTACCAATCTTCTAATCCAAACTCTTCTTTACCTATGCCTCTCACTCTCCCTCCTTCTTCTTCTTCTCCTTCTTCCTCTTGTGATGATGGCCTTCCCAGACCCGATTTTTCTGTAGATGATACTTTTGAGTTGGAGCACTTGGATTATAAGTTGCTCGAAGAACTCCTTCAGATGCAAGATAACAGACACTTGTACAACTCGTATCCAAGTGAGATTGGACATTTTGTTATTAAGTGA 462 0.4545 MEGGRSVSSGNAEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSSNPNSSLPMPLTLPPSSSSPSSSCDDGLPRPDFSVDDTFELEHLDYKLLEELLQMQDNRHLYNSYPSEIGHFVIK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10840g00002 153 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Mupr10840g00002 153 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Mupr10840g00002 153 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Mupr10840g00002 153 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Mupr10840g00002 153 MobiDBLite consensus disorder prediction 74 107 - -
Mupr10840g00002 153 FunFam Ethylene-responsive transcription factor 2 14 74 - -
Mupr10840g00002 153 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Mupr10840g00002 153 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Mupr10840g00002 153 PANTHER DNA-BINDING DOMAIN 12 100 IPR044808 GO:0003700|GO:0009873
Mupr10840g00002 153 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Mupr10840g00002 153 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10840g00002 Mupr-Chr10840 10050 10616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10840g00002 11 138 AP2-EREBP Transcription Factor Family AT3G23230 54.688 4.94e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr10840g00002 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10840g00002 - - gsj:114381985 183.341