Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10840g00001 ATGGATTTTGATTCATCTTTCTTCCATTACCAAAACCTTAACACTTCCTCTGTGTGTGCAGAATCATTCCCTTGGGAAGACTTTTTCTTCTTCAATGAAGAAAACAGCAGCAGCAACCTTAATCCCTTGAACTTGAGTGATCACTACTCACAATCACAAATCAAGGAATCATCCTCGGATTCCAACTGTTCAGGCTCTTTGGCCAGCACGGAGTCACAAGAAGTGTCCTCCATTTTAACTCATTCCCAAAAGGAAACACATGCAGCATCAGCACCAAGCAAGGAAAGTAACAAAGAGAAGAGACCCTTCAGAGGAGTAAGGAGAAGGCCATGGGGGAAGTTCGCTGCAGAGATAAGGGACTCCACAAGAAATGGGGTTCGAGTGTGGATAGGGACATTTGACACAGCAGAGGCAGCAGCACTAGCTTATGACCAAGCAGCTTTATCCACAAGAGGCTCCATGGCAGTGCTGAATTTCCCAGAGGAAGTGGTGAGGGAGTCACTCAAAGACATGGCCAATAAGCCATGGGAAGATGGCTCTTCTCCTGTCTTGGCACTCAAAAGGAAACACACCATGAGAAGAAAGTCCAAGGCCACTAACAAAAAGACTGCTAAAAGGGATCATGGAAGGGAGCTAGAGAATGTGTTTTCCCAAAATGTGCTGGTCTTGGAGGATTTGGGTTCTGAATACTTAGAGCAACTTCTCAGCTTAACTTCATCTCAATGTCGTCATAAAGTAATGAGAGAGAAGAATAAGAGTTCAATTGTACAATAA 774 0.4419 MDFDSSFFHYQNLNTSSVCAESFPWEDFFFFNEENSSSNLNPLNLSDHYSQSQIKESSSDSNCSGSLASTESQEVSSILTHSQKETHAASAPSKESNKEKRPFRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMANKPWEDGSSPVLALKRKHTMRRKSKATNKKTAKRDHGRELENVFSQNVLVLEDLGSEYLEQLLSLTSSQCRHKVMREKNKSSIVQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10840g00001 257 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Mupr10840g00001 257 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Mupr10840g00001 257 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Mupr10840g00001 257 FunFam Ethylene-responsive transcription factor 2 101 161 - -
Mupr10840g00001 257 Gene3D AP2/ERF domain 102 162 IPR036955 GO:0003700|GO:0006355
Mupr10840g00001 257 SUPERFAMILY DNA-binding domain 103 161 IPR016177 GO:0003677
Mupr10840g00001 257 MobiDBLite consensus disorder prediction 74 106 - -
Mupr10840g00001 257 MobiDBLite consensus disorder prediction 74 90 - -
Mupr10840g00001 257 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Mupr10840g00001 257 PANTHER DNA-BINDING DOMAIN 61 239 IPR044808 GO:0003700|GO:0009873
Mupr10840g00001 257 CDD AP2 103 161 IPR001471 GO:0003700|GO:0006355
Mupr10840g00001 257 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10840g00001 Mupr-Chr10840 616 1682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10840g00001 74 235 AP2-EREBP Transcription Factor Family AT3G23240 56.790 1.14e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr10840g00001 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10840g00001 K14516 - gmx:100784784 327.791