Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10839g00003 ATGGAAATGGAAGCTTTTGTATGGGGTGATGGCATTGATGGAGATGCCCCTATGAGGAGTAGTGATGGTTTTGAAGGGAACAATGGTGTAATTGGAAGTGGGTGTGGTTCATCTTTCTCTCTTGTTTTGGATAGGGAGAGAGGGGAGCTTGTGGAGGCACCTGTGAAATTGGAAAGAAAGGGTGTGTCCACTGAGAGAAGCATTCAAGCTTTGAAGAGCCATAGTGAGGCAGAGAGGAGGAGGAGGGCAAGGATTAATTCACATCTTGATACACTTCGCAGTGTCATTCCAGGTGCTAACAAGATGGACAAAGCAGCGTTACTTGGTGAGGTTATTAGACATTTGAAGGAGCTGAAGAAGAATGCAGCACAAGCTTGTGAAGGTTTGATGATACCAAAGGACAATGATGAAATAAGTGTTGAAGAACAGGAGGGAGGGTTGAATGGTTTTCCTTATTCAATTAGAGCATCACTATGTTGTGAATATAAGCCTGGTTTATTGTCTGATATAAGACAAGCACTAGATGCTCTTCATCTTATGATAACAAGGGCAGATATTGCAACCTTGGAAGGCAGAATGAAGAATGTCTTTGTGATCATTAGCTGCAAAGAACAGAACTTTGAAGATGCTGCATACCGTCAGTTTCTTGCTGGTTCTGTTCACCAAGCTCTTAGGTCTGTGCTCAACAGATTTTCTGTTTCACAGGACATTTTAGGAACCAGGAAAAGAAGGAGGATTTCCATATTCAGTTCTTCATCTTTAGATGATTTCTTGTTTGAATGTGAGACACAACGCAACAGCGAGAATATGGCTCTGTCGTCGCCACTTCAGAACCTCTCTGCAGTGATATCGGCGAGTGGCAATGCCGCCGTGACGGCTCGGCCACCGAGATGGCGTCACTGGGCGGTTAATGCGGCGGCGTCGGACACAAGCACCGGCGCGTCGGTGCAATTGGGTGGGTACGAAGAAGGGAAGCTGGAGCGACCCAAGTGGGCTGGGGAGACCCCTCTTTCTCGTTTGGTTAAAGCTCTTATCTCTTTCAAGCCCTTCTACTCTCTCCTCAAGATTGGTGCAAGACGGGCTTTGATAAGTACAGCTGAGAAGAACAACATACCTTGGAGGGCAATGGCGAAAGAGATTTTAGAGTCGGAAGTGTATGGGGAGATGGACACAATTCAAAACAAGTCTTTAGTGTACCCTGATTATTATTTGAATCCATTCCATGCATATGATGAGGGCAATCTTACATGGCTGGCAGCAGCAGAAGCAGAGGCTGCTACAATGTCAATGGCTAGACGAGCACTTCCAGATGCTTCTTCAATACAGGAAGCAAATCAGATACTACGTGGCAATTGGCTCCGTGCAATTGAACAACACCATATACAGTATTCAAAATCATCTAGGATTGATGACATTCTAGATATTGGATGTTCTGTAGGTATAAGCACAGGATATCTTGCAGACAAGTTCCCCACAGCCAAAGTCACCGGGCTGGATCTGTCACCTTATTTTCTAGCTGTGGCTCAGCATAAGGAAAAGAGAGCAGTGCCTAGAAATCTTCCTATAAGATGGATACATGCAAATGGGGAAGACACAGGATTGCCTTCTAAATCGTTTGACCTTGTTTCTTTTGCTTTTGTGCTTCATGAATGTCCTACAAGAGTTATAGTGAATTTAGCCAGGGAAGCATTCCGTCTCCTTCGGCCAGGAGGCACACTAGCTTTGATAGATTTTTCGCTGAAGTCAAAGGTCCTTCAGGAACTGTCTCCAGTCCTGTTTACATTGGTTAAGAGCACAGAACCCTTTCTGGATGAGTATTACTTAACTGATTTGGATGAAACACTGAGGGAAGCTGGATTTGTGAACATAACATCAATTCTTACAGACCCGAGACACGTGACAATTACGGCAACAGTGCCTCAATGA 1926 0.4476 MEMEAFVWGDGIDGDAPMRSSDGFEGNNGVIGSGCGSSFSLVLDRERGELVEAPVKLERKGVSTERSIQALKSHSEAERRRRARINSHLDTLRSVIPGANKMDKAALLGEVIRHLKELKKNAAQACEGLMIPKDNDEISVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDALHLMITRADIATLEGRMKNVFVIISCKEQNFEDAAYRQFLAGSVHQALRSVLNRFSVSQDILGTRKRRRISIFSSSSLDDFLFECETQRNSENMALSSPLQNLSAVISASGNAAVTARPPRWRHWAVNAAASDTSTGASVQLGGYEEGKLERPKWAGETPLSRLVKALISFKPFYSLLKIGARRALISTAEKNNIPWRAMAKEILESEVYGEMDTIQNKSLVYPDYYLNPFHAYDEGNLTWLAAAEAEAATMSMARRALPDASSIQEANQILRGNWLRAIEQHHIQYSKSSRIDDILDIGCSVGISTGYLADKFPTAKVTGLDLSPYFLAVAQHKEKRAVPRNLPIRWIHANGEDTGLPSKSFDLVSFAFVLHECPTRVIVNLAREAFRLLRPGGTLALIDFSLKSKVLQELSPVLFTLVKSTEPFLDEYYLTDLDETLREAGFVNITSILTDPRHVTITATVPQ 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10839g00003 641 PANTHER TRANSCRIPTION FACTOR BHLH30 42 250 IPR045847 GO:0003700|GO:0006355
Mupr10839g00003 641 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 444 627 IPR029063 -
Mupr10839g00003 641 Pfam Methyltransferase domain 473 574 IPR013216 GO:0008168
Mupr10839g00003 641 CDD ACT_UUR-ACR-like 157 228 - -
Mupr10839g00003 641 Gene3D Vaccinia Virus protein VP39 421 638 IPR029063 -
Mupr10839g00003 641 SMART finulus 75 124 IPR011598 GO:0046983
Mupr10839g00003 641 Gene3D - 64 126 IPR036638 GO:0046983
Mupr10839g00003 641 CDD AdoMet_MTases 471 578 - -
Mupr10839g00003 641 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Mupr10839g00003 641 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 124 IPR036638 GO:0046983
Mupr10839g00003 641 Pfam Helix-loop-helix DNA-binding domain 73 118 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10839g00003 Mupr-Chr10839 22142 36140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10839g00003 56 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 39.286 2.33e-30 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10839g00003 Methyltransf_11 1.4e-19 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10839g00003 - - gmx:100788294 650.973