Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10832g00002 ATGGACAAAGTAAATACAGTTAGTGCCAAAGATGAAGAGCGTCCACTCCGAATCACCAGAGCAAGGGCTAGAGCCTTGAGAGGGCTTCCTCCCTACTCAAGACCCTCCTTTAAAAATGAGCATAAAAACGTGCTTCGACCAAATTCCAAAAGAGCAGTTTCTGAAGACAAAAGTTCTGTGGTTGTTCCTGCTTTTGTCCAGCATAAGGGAAGAGCAGCGCTTACAGATGTAACAAACATCCTTGCAAAATCGCATGATAAGTGTTCTAAGGCTTCAAAATTTCAGGCCAAAGGAGTTTATACGAAGAAAAGCACAAAGCTAGCTTCAGGTGTTTCCATTGAAGTTTCATCATCACAAGAGGATGTGAGAGCAAAATTAGCTGAAGAATTATCCACAATAAGGATGGTAGAATCGAATGACACCATAAGAGAACGTGTTATGGCAGACGCTACACTTTCAATGCAAGACTCTGTGAAATCTGATGAACTCCTGAACCCTTCAAACAAAGACATAGACATGATTTGTGAGAAGCTAGGAGCCTCAGACTCTCTGGCTATTGTGGACATTGATTCGGAGTTAAAGGATCCTCAAATTTGGAGTTCTTATGCCCCTGACATATACAACAAAATTCGAGTCACAGAGCTTGAAAGGAAACCATTCACCAACTACATGGATGAGTTGCAGCAAGATATTAATCCAAGCATGCGTGGAATTCTGGTTGATTGGCTTGTGGAGGTTTCCGAGGAATACAAGTTGGTTCCAGACACTCTTTACCTGACAGTGAACCTCATTGATCGGTATCTCTCAACAAGATTCATTCAGAAGCAAAAGCTACAGTTGCTCGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAAATGTGTGCACCTCGAGTGGAGGAATTTTGCTTCATCACGGATAATACATACACAAAAGAAGAGTTATCTGTTCCCACAGTCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGCTCCGTGTGTTAAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTGCTCTTGTTGACTACGGCTTCTTCCAGTTTCTACCTTCCCTTGTAGCAGCATCTGCTGTGTTCCTTGCCAGATGGACCCTCAACGAGTCAGAACATCCATGGAATCCAACTCTGGTGCACTACACAAACTACAAAGCTTCAGATCTCAAAACTGCCGTTCTTGCACTGCAAGATCTGCAACTCAATACCAAAGGCTGTTCCCTGAATGCTGTACGCGAGAAATATAAACAACAAAAGTACTAA 1302 0.4232 MDKVNTVSAKDEERPLRITRARARALRGLPPYSRPSFKNEHKNVLRPNSKRAVSEDKSSVVVPAFVQHKGRAALTDVTNILAKSHDKCSKASKFQAKGVYTKKSTKLASGVSIEVSSSQEDVRAKLAEELSTIRMVESNDTIRERVMADATLSMQDSVKSDELLNPSNKDIDMICEKLGASDSLAIVDIDSELKDPQIWSSYAPDIYNKIRVTELERKPFTNYMDELQQDINPSMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRYLSTRFIQKQKLQLLGVTCMLIASKYEEMCAPRVEEFCFITDNTYTKEELSVPTVKTFLRRFIQAAQSSYKAPCVKLEFLANYLAELALVDYGFFQFLPSLVAASAVFLARWTLNESEHPWNPTLVHYTNYKASDLKTAVLALQDLQLNTKGCSLNAVREKYKQQKY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10832g00002 433 SUPERFAMILY Cyclin-like 194 316 IPR036915 -
Mupr10832g00002 433 PANTHER CYCLINS 155 430 IPR039361 -
Mupr10832g00002 433 SMART cyclin_7 327 411 IPR013763 -
Mupr10832g00002 433 SMART cyclin_7 241 326 IPR013763 -
Mupr10832g00002 433 SUPERFAMILY Cyclin-like 318 433 IPR036915 -
Mupr10832g00002 433 PIRSF Cyclin_A_B_D_E 30 433 IPR046965 GO:0016538|GO:0044772
Mupr10832g00002 433 Gene3D - 219 317 - -
Mupr10832g00002 433 SMART Cyclin_C_2 319 433 IPR004367 -
Mupr10832g00002 433 Pfam Cyclin, C-terminal domain 319 433 IPR004367 -
Mupr10832g00002 433 Gene3D - 205 433 - -
Mupr10832g00002 433 ProSitePatterns Cyclins signature. 236 267 IPR006671 -
Mupr10832g00002 433 Pfam Cyclin, N-terminal domain 205 316 IPR006671 -
Mupr10832g00002 433 CDD CYCLIN_AtCycA-like_rpt2 319 433 - -
Mupr10832g00002 433 FunFam Cyclin A1 306 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10832g00002 Mupr-Chr10832 10447 13972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10832g00002 8 433 Core Cell Cycle Gene Families AT5G25380 51.020 7.30e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10832g00002 K06627 - gmx:547780 695.271