Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10827g00002 ATGGAGAATCAGCAATTCACGTTTTGGAAGTCTAATTATGACATTGATGAAAATCCATTTGCACCTACGTGCCAATTTTCTTCATACGATTATAGCAGGGGTAATGCTAATGATGGGTATCAATATCCTTGGCCATATGAATTTCCTTTGCAAGATGGATACCTTGATGCTATCCCTTTTATGAAGTGTTATTATCCTCATGATATTTTATATGAAACTCTGGCCATTGAACCAACACCACTAAGCGTACAAGACTATGACTTTTGTGACGTTAAAAATGTGCTTTCTGCGTGGAACGAAATTGAGGGTTCGGATAAACCTGTGTTTTCGTCATGCAACGATGGAGAAAGTGTAAATAAAACGAGAGAAGATTTGAAGGGTAAGCAATGCAGAGAAGAGAGAAGTAACAGTGCGAGAATGTTAACAAGGAAAACCGTTTCTCAATACTTCTACATGCCGATATCTCAAGCAGCAAGAGAGCTTAATGTGGGACTCACACACTTGAAGAAAAGGTGTAGGGAGTTAGGTATTCAGAGGTGGCCACACAGGAAGCTAATGAGTCTGCAAACCCTTATAAAGAATATACAAGAGCAAGGAGAGGAAGGGCATGAAAATGATGAAAAAATAAGGTGTGCCATTGGGATGTTGGAGAGAGAAAAGAGGATGGTGGAGGAAATGCCTGATTTGGAACTTGAAGTTAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCATGGGCATGAGGTTCATGGAATTGGAACCAACATCTTCCCTTAGTGGCCTGTCCAACAAGTATTGA 822 0.399 MENQQFTFWKSNYDIDENPFAPTCQFSSYDYSRGNANDGYQYPWPYEFPLQDGYLDAIPFMKCYYPHDILYETLAIEPTPLSVQDYDFCDVKNVLSAWNEIEGSDKPVFSSCNDGESVNKTREDLKGKQCREERSNSARMLTRKTVSQYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNIQEQGEEGHENDEKIRCAIGMLEREKRMVEEMPDLELEVNTRRLRQACFKANYKKRKLMGMRFMELEPTSSLSGLSNKY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10827g00002 273 PANTHER PROTEIN RKD4 123 253 IPR044607 GO:0003700
Mupr10827g00002 273 ProSiteProfiles RWP-RK domain profile. 122 208 IPR003035 -
Mupr10827g00002 273 Pfam RWP-RK domain 141 188 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10827g00002 Mupr-Chr10827 16105 17403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10827g00002 7 255 AtRKD Transcription Factor Family AT1G18790 40.467 4.75e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr10827g00002 RWP-RK 4.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10827g00002 - - gmx:100782238 445.662