Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10820g00002 ATGACCATGCTATCTCATTCATTTACTATGGTTGCAACATTAATAATTATTGTTCTTGCACAAACACTTGTGGGGGTGAGTTCACTTCCTGAAGCTGATAAAATAAGCACTTTGCCGGGGCAGCCACAGGTCAAATTTCAGCAATATTCTGGTTACGTTGCCGTGGATGACCAAAATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTGCTTCCAAGCCATTAGTCCTCTGGTTGAATGGAGGGCCTGGTTGTTCATCTATTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTCAGACCGAGTGATAACAATGTTCTTGAGAAAAATTATTATAGTTGGAACAAAGAGGCAAATGTGCTATACTTGGAGTCACCAGCTGGTGTTGGATTCTCTTACTCTCGCAACAAATCTTTCTATGCCTTAGTGACAGATGAAATTACAGCTAGGGATAATCTTGTTTTCCTACAGCGCTGGTTCACTAAATTCCCTGAGTACTCAAATAACGACTTCTTCATTACAGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCACAACTTATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTGGAGTTTAATACTGATTTCAACTCCAGATCTGAGTTCTTTTGGTCCCATGGACTAATATCAGATTCAACATACGAAGACTTAACTAGAGTCTGCAACTATTCCTCAATTAGGAGACAAATCCAAAATGATAATCTTAGAGGCGTATGTGCAACAGTAAGTAAGCTATTGTCTACTGAGGTTAGCAACTACATAGACCCATATGATGTCACTCTCGATGTTTGTTTGTCATCAGTAAATCAACAGGCTTATGTGCTGAATCAACTGCAAGAGACTCAGAAGATAGATGTTTGTGTTGGTGATAAAACAACCACATACTTGAACAGGAAAGAAGTCCAAGAAGCTCTTCATGCTAATCTTGTTGGAGTCGCCAAATGGTCAACTTGCAGCGTCGTTCTGAATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCAGGCATCAGGGTTCTAGTATACAGCGGAGATCAAGATTCAGTGATTCCATTGATAGGTTCGCGATCTCTAGTGAACGGATTGGCCAAGGAAATTGGAGTGAATACAACAGTGACCTATAGAACCTGGTTTGAGGAAAAACAGGTAGCAGGATGGACACAAGTATACGAGGATATCTTATCATATGCCACTATAAGAGGAGCATCTCATGAAGCCCCTTTTTCTCAACCGCAGAGATCACTAGTGCTATTTAAAGCATTTCTAGAAGGAAAGCCATTACCTAGTGCTACGTGTCTTCTGGATCGGCTCATTGGACCGACCCAATTATGGGGAGATTGGCTAGTTCAAAGTCCCCCTCCTTCTGGGTCATGGCGCCTTATCGGGTCAGGATGTTCTCATTATTGGGCCTGGGCCAAATGGCCGGCTAGTACACAGCCCCTCAAGCTCTTGACTATAGGTGAGGAAGTTAATTTTCCTTTTGCATTATGTCGGTCGGACATTCCTTGTGGCCTTTCTGGCTGGTTGGCCATGCTGGTCCCAGTCCCTCGGCCTTTCTGA 1653 0.4271 MTMLSHSFTMVATLIIIVLAQTLVGVSSLPEADKISTLPGQPQVKFQQYSGYVAVDDQNQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLEKNYYSWNKEANVLYLESPAGVGFSYSRNKSFYALVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRSEFFWSHGLISDSTYEDLTRVCNYSSIRRQIQNDNLRGVCATVSKLLSTEVSNYIDPYDVTLDVCLSSVNQQAYVLNQLQETQKIDVCVGDKTTTYLNRKEVQEALHANLVGVAKWSTCSVVLNYDYQNLEIPTIPILGSLVKSGIRVLVYSGDQDSVIPLIGSRSLVNGLAKEIGVNTTVTYRTWFEEKQVAGWTQVYEDILSYATIRGASHEAPFSQPQRSLVLFKAFLEGKPLPSATCLLDRLIGPTQLWGDWLVQSPPPSGSWRLIGSGCSHYWAWAKWPASTQPLKLLTIGEEVNFPFALCRSDIPCGLSGWLAMLVPVPRPF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10820g00002 550 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Mupr10820g00002 550 Pfam Serine carboxypeptidase 39 455 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Mupr10820g00002 550 FunFam Carboxypeptidase 28 459 - -
Mupr10820g00002 550 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 442 IPR001563 GO:0004185|GO:0006508
Mupr10820g00002 550 Gene3D alpha/beta hydrolase 27 459 IPR029058 -
Mupr10820g00002 550 FunFam Carboxypeptidase 356 455 - -
Mupr10820g00002 550 SUPERFAMILY alpha/beta-Hydrolases 37 459 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10820g00002 Mupr-Chr10820 3558 7342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10820g00002 318 458 Calmodulin-binding Proteins AT2G22960 31.206 1.06e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10820g00002 K16297 - gmx:100799900 838.565