Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10790g00002 ATGAAACATGTCTGCTTCAAGCATACACCACAACTTGTCTCCATGCTATTTTTTCTCTTTGGTTTGGTGGGTTCCCCATTGAACATGGAAACTGAATCTGCAGACTCTTCCAAGGATAATAATAACCAAGGCCATGGCACCACTGAAAATAGAGATGATATCCCAATTCAAAAGGGTCCAGCATCATCTGAAATAACTGAGGAAGTCCCAAGTGGACAACATGGAACAAGGCAAAACCTTTTCTTGGAGATACCTGCAATAATTCAGGAGGAAGCAAGAGAAGATTATGTGAGAATAAACATGCCTCTAACTCCACCTCCAAGAAGAGTGATTTTTTCCCCCTGTCCAAGTCCTGTATTCCCCAGAAGCAAAGAATCCCCAGGTCCCTCCTCATCAAAAAATAGATCAACTATCAAAACCTTTCTTCCCAAACTCAGTTTTAAATTTCGCAACACAAGTTCAGAGATTGAAAAGGCCGCCTTCCTAGCACTTGAAGGATCAGCAACAGTGGCACCAAAAAAGCCTTTTCTCTCAAGAACATTATCTCTTGTCACACCTAGAGGGAAGAAAACATCATCCTTACCTGTAACTCCAATTGCTCATTCAAATCCAGGGTCTGTACATGGAGCGAACATGGCTAGTATAGCAACAGCTATTGAGAAAGAACTGAAAATACCAATTCATCGTTCCCGTTCAGTACCTGTGCTTAACAAAGAAGGTAGCTCACCTGTACGTGGCATGTTTCGTATAGTTCCGACCACACCACGAATGGATGAGAAAATTGCCACAACACCTATGGCATCTCCAATTCATGATACTGTTGAAAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAACTGGGAGAAGGTGCTGATACTTTTAAATTGGAATGTAGCTGCAAAGGTGAGCTTTCATTGGCACACAAAGAATGTGTAGTCAAATGGTTTACCATTAAAGGTAATAGAACATGTGATGTGTGCAAGCAAGAAGTTAAGAACCTACCTGTCACTCTTTTACGAGTACAAAATGGTCAGAACATGCTAGGGGGCAGTCAGCAAGCTGATTCTTACAGGGTTTGGCAGGATGCTCCCATTCTTGTTGTTATCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTGTCTAGTATGGGATCTGGTGCTATTGCCATGTCTCTCCCATTTTCTTGTATATTGGGTCTTCTTGCAAGCATGACAACTACAACAATGGGTAAGGCTTTTTCTACTCTTAAACAACTCTGTGTACTTGAATTCCTCCTTTGGTGTTATATAATGCATAGAGCCATGATCAGTGAGCTAAAAGCTGATCAATCAAATGTTTTTAAAATTAGCATGGTTGTGGATTTCAATATGTTGGTCTTCAATGTTCATATGGAAGCTGTTCTAGCTATCCTACTAGCTACATTTACTGGGTTTGGAGTTGTAATGTGTGGAGCTTCTCTTATTATGGAGATTTTGAAGTGGAGGAGAAGATCACATGCTCGGTCAAATCAACAGCATGGTTCCCAAGAGGCAGTACCACCTGATCAATCTACAGTTACTCATCAAGCTCAGATTGATTCTGAACAAACTGAAAGTAATTTGGGAGAGCCTCCTGTGCAGAGGAGTTGA 1668 0.4113 MKHVCFKHTPQLVSMLFFLFGLVGSPLNMETESADSSKDNNNQGHGTTENRDDIPIQKGPASSEITEEVPSGQHGTRQNLFLEIPAIIQEEAREDYVRINMPLTPPPRRVIFSPCPSPVFPRSKESPGPSSSKNRSTIKTFLPKLSFKFRNTSSEIEKAAFLALEGSATVAPKKPFLSRTLSLVTPRGKKTSSLPVTPIAHSNPGSVHGANMASIATAIEKELKIPIHRSRSVPVLNKEGSSPVRGMFRIVPTTPRMDEKIATTPMASPIHDTVENEDGGEDIPEEEAVCRICMVELGEGADTFKLECSCKGELSLAHKECVVKWFTIKGNRTCDVCKQEVKNLPVTLLRVQNGQNMLGGSQQADSYRVWQDAPILVVINMLAYFCFLEQLLVSSMGSGAIAMSLPFSCILGLLASMTTTTMGKAFSTLKQLCVLEFLLWCYIMHRAMISELKADQSNVFKISMVVDFNMLVFNVHMEAVLAILLATFTGFGVVMCGASLIMEILKWRRRSHARSNQQHGSQEAVPPDQSTVTHQAQIDSEQTESNLGEPPVQRS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10790g00002 555 MobiDBLite consensus disorder prediction 517 555 - -
Mupr10790g00002 555 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 346 IPR013083 -
Mupr10790g00002 555 ProSiteProfiles Zinc finger RING-CH-type profile. 282 344 IPR011016 GO:0008270
Mupr10790g00002 555 MobiDBLite consensus disorder prediction 515 555 - -
Mupr10790g00002 555 CDD RING_CH-C4HC3_MARCH 290 338 - -
Mupr10790g00002 555 PANTHER OS02G0165000 PROTEIN 460 526 - -
Mupr10790g00002 555 Pfam RING-variant domain 290 337 IPR011016 GO:0008270
Mupr10790g00002 555 SUPERFAMILY RING/U-box 286 341 - -
Mupr10790g00002 555 MobiDBLite consensus disorder prediction 30 76 - -
Mupr10790g00002 555 SMART ringv_2 289 338 IPR011016 GO:0008270
Mupr10790g00002 555 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10790g00002 Mupr-Chr10790 16942 22900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10790g00002 284 344 C3H Transcription Factor Family AT2G37950 40.323 5.16e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10790g00002 - - gmx:100787963 790.801