Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1076g00003 ATGGGAAGGACACCATGTTGTGACAAGAAGGGTTTGAAGAAGGGACCTTGGACAGCTGAAGAGGATGAAATTCTTGCTAGCTATATCAAGAAAAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCAAGGATGGCAGGTCTTCTTCGATGTGGCAAGAGTTGCAGACTTAGGTGGACGAACTATCTGAGACCTGACATTAAGCGAGGTTCCTTTACTCTTGAGGAAGAAAAACTAGTGATACAGCTTCATGGGATCCTAGGCAATAGGTGGGCGGCAATAGCGTCTCAGTTAGCAGGAAGAACAGACAATGAGATAAAGAACTTATGGAACACCCACTTGAAGAAGCGTCTCAAGAGCATGGGGCTTGACCCCAAAACCCACGAGCCAGTTGGGTCATCATCCTCTTACCCGTTTCAGAAGGCCCATGCATCTGTGTCCACACGCCACATGGCCCAATGGGAGAGTGCCAGGCTGGAAGCAGAGGCCAGGCTGTCAAATGAGTCATCAAGGTTCACCACCAATCCTTCTTCCTTCAACAAAACCACTGACTCTGATTACTTCCTTCGCATTTGGAACTCTGAAGTTGGAGAGGCTTTTCGCAATGCTCATCATCATCATCATCATAGTCACAAACCTGATGATAATAATATCAACAACAAGATCACAGCATTGTGCCATAGTCCTCTCTCTGCAGGATCATCTTCCAACAAGTGTGAGTCTAATGCACAAGGAACACCCTCTGATCTTGTCAAGGAAGAGTTGGAGTGGACCACTCGTGGATGCGACTCCTCCAGCTCCAATGACATGGAAGATTCCTCAGACACTGCTTTGCAGCTCTTGTTAGATTTTCCTATAAACAATGACATGAGCTTCTTGGAAGGAAACTCTTTTGGTTCTCCACTT 903 0.4662 MGRTPCCDKKGLKKGPWTAEEDEILASYIKKNGGHGSWRSLPRMAGLLRCGKSCRLRWTNYLRPDIKRGSFTLEEEKLVIQLHGILGNRWAAIASQLAGRTDNEIKNLWNTHLKKRLKSMGLDPKTHEPVGSSSSYPFQKAHASVSTRHMAQWESARLEAEARLSNESSRFTTNPSSFNKTTDSDYFLRIWNSEVGEAFRNAHHHHHHSHKPDDNNINNKITALCHSPLSAGSSSNKCESNAQGTPSDLVKEELEWTTRGCDSSSSNDMEDSSDTALQLLLDFPINNDMSFLEGNSFGSPL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1076g00003 301 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mupr1076g00003 301 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr1076g00003 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mupr1076g00003 301 Gene3D - 70 136 - -
Mupr1076g00003 301 CDD SANT 16 62 IPR001005 -
Mupr1076g00003 301 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mupr1076g00003 301 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr1076g00003 301 SMART sant 67 115 IPR001005 -
Mupr1076g00003 301 SMART sant 13 64 IPR001005 -
Mupr1076g00003 301 FunFam Myb transcription factor 11 68 - -
Mupr1076g00003 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr1076g00003 301 CDD SANT 70 113 IPR001005 -
Mupr1076g00003 301 Gene3D - 11 68 - -
Mupr1076g00003 301 MobiDBLite consensus disorder prediction 121 141 - -
Mupr1076g00003 301 FunFam MYB transcription factor 69 130 - -
Mupr1076g00003 301 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr1076g00003 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1076g00003 Mupr-Chr1076 23166 24737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1076g00003 1 295 MYB Transcription Factor Family AT3G61250 63.545 2.54e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1076g00003 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1076g00003 K09422 - gmx:100800408 508.449