Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1076g00001 ATGTCATTCACTGGAACTCTCGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGACTTGCTAACTCTTGAAGGTATACCTTACCACAAAAACTGCTTCAGATGCAGTCACTGCAAGGGATATCTCACTATGAGCACTTACTCTTCCATGGATGGGGTCCTCTACTGCAAGCCACACTTTGAGCAGCTTTTCAAGGAATCTGGCAATTTCAGCAAGAACTTTCAGACAGCAAAGTCTGCTGATAAACAAAATGAGACGAATAAGGCACCCCCCAGCAGACTCTCTTCCATGTTCAGTGGAACTCTAGACAAATGCTCAGTTTGTTCAAAAACAGTCTATCCTCTGGAAAAGATGACACTGGAAGGGGAATGCTATCACAAGAATTGTTTTAGATGTTTAGGGGAAGCATTGAATGACAAAGAAGTCTAA 435 0.4207 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKNCFRCSHCKGYLTMSTYSSMDGVLYCKPHFEQLFKESGNFSKNFQTAKSADKQNETNKAPPSRLSSMFSGTLDKCSVCSKTVYPLEKMTLEGECYHKNCFRCLGEALNDKEV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1076g00001 144 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Mupr1076g00001 144 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Mupr1076g00001 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 99 132 - -
Mupr1076g00001 144 Gene3D Cysteine Rich Protein 5 96 - -
Mupr1076g00001 144 Gene3D Cysteine Rich Protein 97 141 - -
Mupr1076g00001 144 CDD LIM1_SF3 6 68 - -
Mupr1076g00001 144 FunFam LIM domain and actin-binding 1 4 74 - -
Mupr1076g00001 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Mupr1076g00001 144 PANTHER OS06G0237300 PROTEIN 102 134 - -
Mupr1076g00001 144 SMART lim_4 9 61 IPR001781 -
Mupr1076g00001 144 SMART lim_4 106 144 IPR001781 -
Mupr1076g00001 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Mupr1076g00001 144 Pfam LIM domain 10 65 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1076g00001 Mupr-Chr1076 409 2615 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Mupr1076g00001 LIM 4.4e-12 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1076g00001 - - gmx:100779513 276.559