Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10763g00002 ATGGTTGGATTGGAACTCATACCCGTAGGTACAATTTTGGCTGTTCTAAGCAGCCAGGTCGTGAAAACAGCTAATGCAGCAATTGATGTTGCTGTTGATAAAGAAAGTTTCAAGGTCCTTTCAAAACACCTGCTCGATATTGCACCAGTCCTAAAGGAATTACAGCTTCAGAAATTGAATGAGTCTCAAGCTGCAAGGGTTGCTCTGGTGTCCTTTGAATCAGATGTCAAAAAGGCGAATAGTTTGGTTGAGAAGTACAGGAATCGTGGCCGCTTTTACCTGCTGGTGAGATGCAAATACATAGTCAAGGAGGTTGAACAAGTCACCAGGGATATTGGAAGGTCTCTGGCTGCACTGTCCATTGCAAACACTGAAGTCCTGTCAGGAATTTCTGATCAGGTTGACAGACTGCAGAATGAGATGCAAAAGGTGGAGTTTGAGGCTTCACAGTCTCAGCTTCAAATTGTTGACAAGTTGAGCCATGGAATTAGGGAGCAGAAACTAGATCAGGCTTTTGCAAATGACATGCTTGAGGAAATAGCAAGGGCAGTTGAGGTGCCTGTGGAGCCTTCAGAGATAGGCAAAGAGCTAGCCAGCATTAGGCAGGAAAGGGAGGAAGCAGCCAACAGGAAAGAAAGAGCTGAATTCATTTTTTTGGAGCAGATCATTGAGCTACTGTCGCGAGCTGATGCTGCAAGGGATTATGAAGAAGTTAAGAAGCAATACTTTAGAAGGGTTCAGGTGATAGAGAGATATGATTCAAGGGAAAAATATATTCCACCACTTAATTCTTTCCTTTGTCCCATAACTGGAGCTGTTATGGTAGATCCTGTCAGCCTTTGCACTGGTACTACATGTGAGAGATCTGCCATTGAAGCTTGGTTTGATGATGGCAACAGGACTGACCCAGAAACAGAAGAGGTTCTTGAGGAAACTACCTTGAGATCAAATGTTCGATTAAGAGAGTCCATAGAAGAGTGGAGAGAAGTTAATTACTGCTTTGGAATAAGGTCTATCAGGGAAAGCCTGCTATCCAATTCTGACTTATTAGTGCAACAATCCCTGAGCCAAATTCAGGATCTCATAGGAGAGAATTCCATTAACAAGGATTGGATTTCTGTAGGAGAGCTTACTGATATCATTATCTCCATCCTTGGGAAATCTGATTCCAGAGATGTGAAGATGAAAATCTTGATTACTTTGAAGGATGCTGTAGAGGGACATGCCAGGAACAAGGAAAAAGTGGTTGAATCTCAAGGTTGGTATCACATTATTTTCTGCTTGGGGAGTGACTCTAGAATTTCAAAGGAAGCAATTGATTTGCTGTATGAGTTGCTTCAAAAGCGGTCTGGTTGGAATAGAAGTTTCTGCAAAAAACTCTCTGAGCATCCGAGTGCAGTTTCTTACCTTGTTACTCTTCTAAAGGGTCCTCCTGTAAGTGATTCAGCTGGGGTTTCAGAAAAGATTTTGATAGAGCTTTTCGAGATAGATGAGGGAAACATTTCAGCTGCTGCAAAGTTTGGCTGGTACAAACCGCTTATTGATCGCATGATCCAAGGATCGGAGTCTTCAAGAATGTCAATGGCAAAAACCATAGTTAATTTGGAGTTGAAAGATTTGCACTTGAAACTCCTTGGTGAGCAAGGAGTTATACTTCCTTTGCTAGAAATGCTATCTGGCAGCATTGAATCTAAAGAAGTGTCATTGTCAGCCCTGGTTAAACTATCAAGATTGCATGCCAATAAGGCTATTATTGCTGCATCTAGAGGTGTCCCTCTTGTTCTAGATTTAATATTCTCTCACAGGATACAGTCATTTATTACCTTTAAATGTTGCGAAATCCTTGAGAACCTTGCTTCAGATGAGGATGGAATTGATTTCTTCGTTGATGGAGAAGGGAAACAACTAGAGCTAGATAACATCATCACCAATTTGCTAGCTCTAACGCAGAGTCCGAACTCAGCTGGCTACCGAAAGCCTGCGTTGCGTGCTCTCCTTGGCATTTGCAAGTTTGAGACTGGTTTAGTTAAGAAGGCAGTTCTGGCAGTCAATGGGGTATCTCTAATCATCCCTTTTCTTGATGATTCTGACTCAGAAACGAGGGAAACGGCCATAAATCTTCTCTTTCTTTACTCCCAACATGAGCCAGAAGGAGTATTTGAATACCTCTTCAGACCAAGAAGACTAGAAATTTTGGTTGAGTTTCTTGAGAACAATGATGTGCAAATGGCTGCTGCTGGTTTACTGGCCAACCTTCCAAAATCCGAACGAGAATTCACCATGAAGTTGATTGACTTAGGAGGCCTTGATGCAATCATAAGCATTTTGAACAACGGTACAATGGAGGCAAAAGAAAATGCTCTCAATGCACTCTTCAGGTTCACAGACCCTACAAATATTGATTCACAGCGCAATTTGATTAAACGAGGAATATATCCTTTGCTTGTAAGCTTTCTCAACACTGGTTCAGTAACAGCAAAGGCAAGAGCAGCAGCATTCATTGGTGATCTTTCTATGAGCACTCCAAAGCTCACAGCTGTTTCCAAACCAACTGGTTGGTGGTGTTTTAGATCATCACAAGTTCCTTTGTGTTCAGCACATGGGAGTGTATGCAGTGTGAGTTCCACATTTTGTTTATTGGAAGCAAAAGCCTTGCCTGGCTTGATAAGGCTGTTGCATGGGGAGGTGCATGCAACTGCTTATGAAGCTGTAAAGACTCTTTCCACATTGGTTTTGGAAGAGTTTCCCCAAAGGGGGGCTCTTGTGTTGCATGAGTCAAATGCAATGAGACCCCTATTGGAAATTTTGAACTGGGGAACTAATTCTCTCAAGGCAGAAGCTTTAGGACTGTTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTTGAATACTATGGAACAACAGCTAGATTGCGTCTGAGTGGTCTGAGTGGCATGAGTGTATATGGGGATGGCCACCTAAGGAGAAAGGCTGCCAGGGTGCTGTCATTGCTTGAACGCTATTCAAAGCCATCTTCATCTGCAATCTCTGGACTTCAACAGAATTTGCTCCAAAACCCAAGAATGACTTCTTTGGTCTCTGAAGTGTACAGTCTTGTTGTAACGGTCCTGAAATAA 3114 0.4249 MVGLELIPVGTILAVLSSQVVKTANAAIDVAVDKESFKVLSKHLLDIAPVLKELQLQKLNESQAARVALVSFESDVKKANSLVEKYRNRGRFYLLVRCKYIVKEVEQVTRDIGRSLAALSIANTEVLSGISDQVDRLQNEMQKVEFEASQSQLQIVDKLSHGIREQKLDQAFANDMLEEIARAVEVPVEPSEIGKELASIRQEREEAANRKERAEFIFLEQIIELLSRADAARDYEEVKKQYFRRVQVIERYDSREKYIPPLNSFLCPITGAVMVDPVSLCTGTTCERSAIEAWFDDGNRTDPETEEVLEETTLRSNVRLRESIEEWREVNYCFGIRSIRESLLSNSDLLVQQSLSQIQDLIGENSINKDWISVGELTDIIISILGKSDSRDVKMKILITLKDAVEGHARNKEKVVESQGWYHIIFCLGSDSRISKEAIDLLYELLQKRSGWNRSFCKKLSEHPSAVSYLVTLLKGPPVSDSAGVSEKILIELFEIDEGNISAAAKFGWYKPLIDRMIQGSESSRMSMAKTIVNLELKDLHLKLLGEQGVILPLLEMLSGSIESKEVSLSALVKLSRLHANKAIIAASRGVPLVLDLIFSHRIQSFITFKCCEILENLASDEDGIDFFVDGEGKQLELDNIITNLLALTQSPNSAGYRKPALRALLGICKFETGLVKKAVLAVNGVSLIIPFLDDSDSETRETAINLLFLYSQHEPEGVFEYLFRPRRLEILVEFLENNDVQMAAAGLLANLPKSEREFTMKLIDLGGLDAIISILNNGTMEAKENALNALFRFTDPTNIDSQRNLIKRGIYPLLVSFLNTGSVTAKARAAAFIGDLSMSTPKLTAVSKPTGWWCFRSSQVPLCSAHGSVCSVSSTFCLLEAKALPGLIRLLHGEVHATAYEAVKTLSTLVLEEFPQRGALVLHESNAMRPLLEILNWGTNSLKAEALGLLEKVFVSKEMVEYYGTTARLRLSGLSGMSVYGDGHLRRKAARVLSLLERYSKPSSSAISGLQQNLLQNPRMTSLVSEVYSLVVTVLK 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10763g00002 1037 Coils Coil 69 89 - -
Mupr10763g00002 1037 Gene3D - 638 1018 IPR011989 -
Mupr10763g00002 1037 SUPERFAMILY RING/U-box 247 331 - -
Mupr10763g00002 1037 CDD RING-Ubox_PUB 265 303 IPR045210 -
Mupr10763g00002 1037 Gene3D - 9 123 IPR036537 GO:0007166
Mupr10763g00002 1037 Coils Coil 127 154 - -
Mupr10763g00002 1037 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Mupr10763g00002 1037 SUPERFAMILY ARM repeat 368 599 IPR016024 -
Mupr10763g00002 1037 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 326 IPR013083 -
Mupr10763g00002 1037 SMART arm_5 408 447 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 756 796 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 872 912 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 715 754 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 578 620 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 538 577 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 916 956 IPR000225 GO:0005515
Mupr10763g00002 1037 SMART arm_5 673 713 IPR000225 GO:0005515
Mupr10763g00002 1037 SUPERFAMILY ARM repeat 554 956 IPR016024 -
Mupr10763g00002 1037 Gene3D - 327 499 IPR011989 -
Mupr10763g00002 1037 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Mupr10763g00002 1037 Pfam U-box domain 264 329 IPR003613 GO:0004842|GO:0016567
Mupr10763g00002 1037 Gene3D - 508 633 IPR011989 -
Mupr10763g00002 1037 Coils Coil 197 217 - -
Mupr10763g00002 1037 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 11 1005 - -
Mupr10763g00002 1037 CDD MLKL_NTD 18 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10763g00002 Mupr-Chr10763 15983 19996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10763g00002 264 970 U-box Gene Family AT1G20780 27.668 2.14e-39 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10763g00002 - - gsj:114377374 1697.95