Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10755g00001 ATGGAGAAAGAAGAAGAAGAAGCTCTCTTGCTTGCTCCTCTTTTCTCGCGATTTGAACCAGAACTGAGGTTAAAGCCAGTGCTGTCTCCAACTCTATTTGTTATTTTGATAAGCGCATCTCAACCCAGAAGCCACATGATGAACCACTTGACCATTGAGACTGAAGATTCTCTTGCAAGCTTACTTGAGCTTGCAGCTAATAATGATGTTGAAGGTTTCAAACGAATGATTGAGAGGGATCCTTCCTGTGTAGATGAGGTAGGACTATGGTATAGTCGTCAGAAGGGATCTAGGCGGATGGTCAATGAATTCAGAACCCCATTGATGGTTGCTGCTACTTATGGTAGCATTGATGTTTTGGATCTGATTCTTTCACTTTCTGGTTGCGATATTAATAAACCTTGCGGCCTTGACAAGAGCACTGCCCTTCACTGTGCGGCATCAGGAGGGGCTGAAAATGCTGTTGATGTTGTTATGTTGCTTCTAGCAGCAGGAGCTGATCCAAATTCTGTGGATGGGAATGGTCATCGTCCAGTTGATGTCATCGTTGTTCCTCCCAAGCATGAATCTGTTAGAAGCAGTCTTGAAGCAGTTCTTCAAACTAATGACTCCATTGCAGTGTGTAATCTTAGGGTGATCACGGCCCCATCAAATGCATATTCTCCACCTTTATCAACTTCACCAGAGAATGGGTCTCCTTCTGCACCAGATTTCCAATTGAAGTCAAAGTTAAATGAGGGCTTTGTTTCTTCTGCATCAGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCGGACATCAAGAATAGCATATATTCAACTGATGAATTCCGAATGTATTCTTTCAAAGTCCGTCCTTGTTCACGGGCTTATTCACATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCTAGAAGAAGGGACCCAAGAAAGTACCACTACAGCTGTGTCCCTTGTCCTGATTTTCGGAAGGGTGCTTGCCGACGTGGAGATATGTGTGAATATGCTCATGGAGTTTTCGAGTGCTGGCTGCATCCAGCACAATATCGAACTCGTCTTTGCAAGGATGGGACAAGTTGCTCCAGAAGAGTTTGCTTTTTTGCTCACACTGCTGAGGAGCTTCGGCCATTATACGTTTCAACTGGTTCTGCTGTACCATCTCCTCGGTCAAGCACATCTTCTGCTATGGATTTTGCTGCAGCCATGAACATGTTGCCTGGGTCTCCTTCCTCAATGTCTGTCATGTCTCCTTCACCGTTCACACCGCCTATGTCACCCTCTGCCAATGGCATGTCACACTCTTCTGTTGGCTGGTCCCAACCAAATGTCCCAGCCTTGCATCTGCCAGGGAGTAATCTTCATTCCAGTCGTTTGAGATCTTCATTCAATGCTAGAGATATTCCTGCAGATGACTTTGACTTGTTGCATGACTATGATGTTCAGCAACAGCATCAGCAACAGCAACAACTCCTTAAT 1485 0.4498 MEKEEEEALLLAPLFSRFEPELRLKPVLSPTLFVILISASQPRSHMMNHLTIETEDSLASLLELAANNDVEGFKRMIERDPSCVDEVGLWYSRQKGSRRMVNEFRTPLMVAATYGSIDVLDLILSLSGCDINKPCGLDKSTALHCAASGGAENAVDVVMLLLAAGADPNSVDGNGHRPVDVIVVPPKHESVRSSLEAVLQTNDSIAVCNLRVITAPSNAYSPPLSTSPENGSPSAPDFQLKSKLNEGFVSSASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCSRRVCFFAHTAEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMNMLPGSPSSMSVMSPSPFTPPMSPSANGMSHSSVGWSQPNVPALHLPGSNLHSSRLRSSFNARDIPADDFDLLHDYDVQQQHQQQQQLLN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10755g00001 495 ProSiteProfiles Ankyrin repeat profile. 138 173 IPR002110 GO:0005515
Mupr10755g00001 495 PANTHER UNKEMPT FAMILY MEMBER 63 457 IPR045234 -
Mupr10755g00001 495 SUPERFAMILY Ankyrin repeat 58 184 IPR036770 -
Mupr10755g00001 495 Gene3D - 38 192 IPR036770 -
Mupr10755g00001 495 ProSiteProfiles Ankyrin repeat region circular profile. 138 172 - -
Mupr10755g00001 495 Gene3D - 316 379 - -
Mupr10755g00001 495 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 321 341 IPR000571 GO:0046872
Mupr10755g00001 495 SMART ANK_2a 138 170 IPR002110 GO:0005515
Mupr10755g00001 495 SMART ANK_2a 103 133 IPR002110 GO:0005515
Mupr10755g00001 495 SMART c3hfinal6 316 342 IPR000571 GO:0046872
Mupr10755g00001 495 SMART c3hfinal6 351 374 IPR000571 GO:0046872
Mupr10755g00001 495 ProSiteProfiles Zinc finger C3H1-type profile. 321 343 IPR000571 GO:0046872
Mupr10755g00001 495 FunFam Zinc finger CCCH domain-containing protein 66 274 342 - -
Mupr10755g00001 495 Pfam Ankyrin repeats (3 copies) 93 172 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10755g00001 Mupr-Chr10755 21 2758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10755g00001 53 486 C2H2 Transcription Factor Family AT5G12850 61.818 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr10755g00001 Ank_2 2.1e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10755g00001 - - gmx:100813554 794.653