Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1073g00002 ATGGCTTATTCATCTCATAAACTCTTCTTCCCTCTGTTTGCAATCTTTTTCTCACACACTTGTATCCACTCTTGCAATGCTTCCACAACATATGAAATCGATATAAGATCTTTCTGCACAACCACCCCATACCCAGAAGTTTGTTTCAATTCATTGAACATATCCTCCTCAATAAAAACAAGTCCAAACATAAACAACTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTGTTAAATCTCTTCCATAATGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCCGGGTCCTCCACCAATCCACATTGGCTTCTTTGGAAAGAACACTATCAGGGATCAGTTCCTCCAATTCCATGAACATAGTTGATGCAAGAACCTACCTCAGTGCAGCCCTCACCAACAAGAACACACGTCTAGAAGGCCTAGATTCTGCTTCTGGCACCATCAAGCCAGTTCAGGTGAAATCTGTGATCAACACTTATAAGCATGTTAGTAACTCTCTTTCAATTCTCTCTAACCCAGAGATGGGGACTCCTGAAAACCAGCCTTTGATGGGTGATCCAAAGTGGGTATCAAGCAGTGACCATGGCCTCTTTCAAGACTTGGATGGGGAAGAATATGACCCAAGTGAAGTGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTTACCACCATCACTGAAGCCATCAACTTTGCTCCATATAACAGCATGGATAGGACAGTGATCCATGTCAAAGAAGGGATTTACAAGGAAAATGTGGAAATCCCACTCTTCAAGATCAACCTTGTGATGCTTGGCGATGGACATCATGTCACTGTCATAACTGGTAACAGAAGCGTTGGTGATGGCTGGACCACTTTCCGATCTGCAACTCTAGCGGTCTCTGGTAATGGTTTTCTGGCACGTGATATAGGGTTTGAGAACAGCGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGGGTAGATGCAGATTCAACTGCTTTTTACAGGTGTGCAATTTATGGTTACCAAAACACTTTATATTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGATTCTACAAGCATGTAACATCGTAACCAAAACACCAATGCCTGGCCAATTCACGGTCATCACTGCACAATCAAGAGACAGCCCAAATGAGAACACTGGCATTTCAATCCAAAACTGCATAATCAAAGCTGCCATTGATCTGCATTCCACCTCTAATAGTTTCAAGAGCTACCTTGGGAGGCCATGGAAGGTGTATTCTCGCACCGTTTACCTCGAGTCCTACATTGGTGACTTCATTGACCCAAGGGGTTGGACAAAGTGGTCTAATAATGATCAGCAAGGATTGGACACCTTGTATTACGGAGAGTATGACAATTATGGACCCGGTTCCAGCACAGATAATCGTGTAGAATGGTTTGGGTACCATGTAATGGATTATAATGATGCCTATAATTTCACAGTTTCAGAGTTCATTAATAATGGAAAGAATTGGCTTGAGTCTACTTTCTTTCCTTATATAGACGGGATTTGA 1578 0.429 MAYSSHKLFFPLFAIFFSHTCIHSCNASTTYEIDIRSFCTTTPYPEVCFNSLNISSSIKTSPNINNYLLQSLQVAISETTKLLNLFHNVGHSNIIEKQRGAVQDCRVLHQSTLASLERTLSGISSSNSMNIVDARTYLSAALTNKNTRLEGLDSASGTIKPVQVKSVINTYKHVSNSLSILSNPEMGTPENQPLMGDPKWVSSSDHGLFQDLDGEEYDPSEVLVVAADGTGNFTTITEAINFAPYNSMDRTVIHVKEGIYKENVEIPLFKINLVMLGDGHHVTVITGNRSVGDGWTTFRSATLAVSGNGFLARDIGFENSAGPEKHQAVALRVDADSTAFYRCAIYGYQNTLYCDIYGTIDFIFGNAAVILQACNIVTKTPMPGQFTVITAQSRDSPNENTGISIQNCIIKAAIDLHSTSNSFKSYLGRPWKVYSRTVYLESYIGDFIDPRGWTKWSNNDQQGLDTLYYGEYDNYGPGSSTDNRVEWFGYHVMDYNDAYNFTVSEFINNGKNWLESTFFPYIDGI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1073g00002 525 SMART PMEI_2 30 180 IPR006501 GO:0004857
Mupr1073g00002 525 ProSitePatterns Pectinesterase signature 1. 247 266 IPR018040 -
Mupr1073g00002 525 Pfam Pectinesterase 223 508 IPR000070 GO:0030599|GO:0042545
Mupr1073g00002 525 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Mupr1073g00002 525 FunFam Pectinesterase 217 525 - -
Mupr1073g00002 525 SUPERFAMILY Pectin lyase-like 220 523 IPR011050 -
Mupr1073g00002 525 CDD PMEI-like_3 37 184 - -
Mupr1073g00002 525 Gene3D - 218 525 IPR012334 -
Mupr1073g00002 525 Pfam Plant invertase/pectin methylesterase inhibitor 35 180 IPR006501 GO:0004857
Mupr1073g00002 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 182 IPR035513 -
Mupr1073g00002 525 NCBIfam pectinesterase inhibitor domain 9 182 IPR006501 GO:0004857
Mupr1073g00002 525 PANTHER PECTINESTERASE 22 515 - -
Mupr1073g00002 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1073g00002 Mupr-Chr1073 12122 14828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1073g00002 31 525 Carbohydrate Esterase AT2G26440 60.618 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1073g00002 - - gmx:102665651 823.542