Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10739g00001 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTTCACAGACCAGACTTGCACTTGCAACACCACCGCGATTCGGAGGAGCAAGAAACGCCGCCGAACCGCGGAACGGCGCCGTTCGACGACGATGATCGAAGCCAAGGCCTAGAGCTAGTTTCGGCGGGTCCCGGTGACGTTGTCGGCCGGCGTCCGCGAGGCAGGCCGCCGGGCTCCAAGAACAAGCCAAAGCCGCCGGTGATCATCACCAGAGAAAGTGCCAACACGCTTAGGGCGCATATTCTCGAAGTCGGAACCGGCTCCGACGTCTTCGACTGCGTCACCACCTACGCTCGCCGCCGCCAGCGCGGGATCTGTATTCTCAGCGGCAGCGGCACCGTCACCAATGTCAGTCTCCGGCAGCCGGCGGCTGCCGGAGCCGTCGTCACGCTGCACGGCAGGTTCGAGATACTGTCCCTCTCTGGCTCGTTCCTGCCGCCGCCGGCTCCGCCGGGGGCCACGAGTCTGACCATATATCTTGCCGGTGGGCAGGGGCAGGTGGTCGGAGGAAGCGTGGTGGGGGAGTTGACGGCGGCGGGGCCGGTGATTGTGATCGCGGCGTCGTTCACCAACGTGGCTTACGAGAGGCTACCCTTGGAGGAAGAGGAACAGCTTCAGATTCAACCACCGGCTACGACGTCGTCTCACGGCGTTGGAAATAACAATAATCATAACCACAACAATAATAATATTAATAACCCTTTCCCTGACCCTTCTTCGGGACTTCCCTTCTTCAATTTGCCACTCAATATGCAGAATGTTCAGTTGCCTGTGGATGGTTGGGCGGGAAACGCAGCTTCTCGTCCACCACCTTTTTGA 864 0.5926 MAGLDLGSASRFVQNLHRPDLHLQHHRDSEEQETPPNRGTAPFDDDDRSQGLELVSAGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGTGSDVFDCVTTYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQLQIQPPATTSSHGVGNNNNHNHNNNNINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNAASRPPPF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10739g00001 287 PIRSF ESCAROLA 6 286 IPR014476 GO:0003680
Mupr10739g00001 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 224 - -
Mupr10739g00001 287 MobiDBLite consensus disorder prediction 220 252 - -
Mupr10739g00001 287 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Mupr10739g00001 287 MobiDBLite consensus disorder prediction 19 51 - -
Mupr10739g00001 287 MobiDBLite consensus disorder prediction 19 83 - -
Mupr10739g00001 287 CDD DUF296 93 176 IPR005175 -
Mupr10739g00001 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 262 IPR014476 GO:0003680
Mupr10739g00001 287 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Mupr10739g00001 287 MobiDBLite consensus disorder prediction 221 252 - -
Mupr10739g00001 287 Gene3D - 92 228 - -
Mupr10739g00001 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10739g00001 Mupr-Chr10739 9733 10596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10739g00001 1 285 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.775 1.33e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10739g00001 - - pvu:PHAVU_003G230600g 457.603